Orthogroup:group_2516


Homologs in group_2516

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02170 FBDBKF_02170 Morganella morganii S1 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
EHELCC_02640 EHELCC_02640 Morganella morganii S2 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
NLDBIP_00820 NLDBIP_00820 Morganella morganii S4 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
LHKJJB_01215 LHKJJB_01215 Morganella morganii S3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
HKOGLL_01255 HKOGLL_01255 Morganella morganii S5 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
F4V73_RS04540 F4V73_RS04540 Morganella psychrotolerans lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase

Distribution of group_2516 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2516 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2516

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2516.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lsrF 6

Product

# Product Occurence
1 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1830 6 G Carbohydrate transport and metabolism (G) Fructose-bisphosphate aldolase class Ia, DhnA family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K08321 6 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245] Quorum sensing -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01791 6 DeoC/LacD family aldolase

Annotations of the 51 SwissProt hits

Annotation Number of occurrences
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase 10
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase 1 1
2-amino-4,5-dihydroxy-6-oxo-7-(phosphonooxy)heptanoate synthase 2
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase 27
Fructose-bisphosphate aldolase class 1 7
Probable fructose-bisphosphate aldolase class 1 1
Putative 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase 2 1
Uncharacterized aldolase PM1278 1
Uncharacterized aldolase SSO3226 1

Protein length

Unique protein length 293

Protein length distribution