COG3607


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3607, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Lactoylglutathione lyase-related enzyme, vicinal oxygen chelate (VOC) family
Function(s) descr. General function prediction only (R)

Occurence in the database

COG3607 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2486 FBDBKF_01380 271842 272222 1 gloA Catechol 2,3-dioxygenase or related enzyme, vicinal oxygen chelate (VOC) family Morganella morganii S1
1 group_2486 EHELCC_00165 36646 37026 -1 gloA Catechol 2,3-dioxygenase or related enzyme, vicinal oxygen chelate (VOC) family Morganella morganii S2
2 group_2486 NLDBIP_03295 643110 643490 1 gloA Catechol 2,3-dioxygenase or related enzyme, vicinal oxygen chelate (VOC) family Morganella morganii S4
3 group_2486 LHKJJB_04810 250351 250731 1 gloA Catechol 2,3-dioxygenase or related enzyme, vicinal oxygen chelate (VOC) family Morganella morganii S3
4 group_2486 HKOGLL_02235 36851 37231 -1 gloA Catechol 2,3-dioxygenase or related enzyme, vicinal oxygen chelate (VOC) family Morganella morganii S5
5 group_2486 F4V73_RS02050 442487 442867 -1 VOC family protein Morganella psychrotolerans