Orthogroup:group_2490


Homologs in group_2490

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01615 FBDBKF_01615 Morganella morganii S1 yobD DUF986 domain-containing protein
EHELCC_02085 EHELCC_02085 Morganella morganii S2 yobD DUF986 domain-containing protein
NLDBIP_01375 NLDBIP_01375 Morganella morganii S4 yobD DUF986 domain-containing protein
LHKJJB_00660 LHKJJB_00660 Morganella morganii S3 yobD DUF986 domain-containing protein
HKOGLL_00700 HKOGLL_00700 Morganella morganii S5 yobD DUF986 domain-containing protein
F4V73_RS03955 F4V73_RS03955 Morganella psychrotolerans - DUF986 family protein

Distribution of group_2490 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2490 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2490

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2490.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yobD 5
2 - 1

Product

# Product Occurence
1 DUF986 domain-containing protein 5
2 DUF986 family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4811 6 S Function unknown (S) Uncharacterized membrane protein YobD, UPF0266 family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06173 6 Protein of unknown function (DUF986)

Annotations of the 69 SwissProt hits

Annotation Number of occurrences
UPF0266 membrane protein CKO_01158 1
UPF0266 membrane protein ECA2388 1
UPF0266 membrane protein ESA_01432 1
UPF0266 membrane protein Ent638_2389 1
UPF0266 membrane protein KPK_1957 1
UPF0266 membrane protein KPN78578_23010 1
UPF0266 membrane protein LMHCC_1856 1
UPF0266 membrane protein LMOf2365_0797 1
UPF0266 membrane protein Lm4b_00795 1
UPF0266 membrane protein NT01EI_1718 1
UPF0266 membrane protein PM0830 1
UPF0266 membrane protein SG1324 1
UPF0266 membrane protein Spro_2816 1
UPF0266 membrane protein YE1773 1
UPF0266 membrane protein YPA_1127 1
UPF0266 membrane protein YPDSF_1369 1
UPF0266 membrane protein YPK_2467 1
UPF0266 membrane protein YPN_2368 1
UPF0266 membrane protein YPO1755/y2554/YP_1637 1
UPF0266 membrane protein YPTB1631 1
UPF0266 membrane protein YPTS_1754 1
UPF0266 membrane protein YobD 42
UPF0266 membrane protein YpAngola_A1654 1
UPF0266 membrane protein YpsIP31758_2371 1
UPF0266 membrane protein lin0773 1
UPF0266 membrane protein lmo0779 1
UPF0266 membrane protein lwe0739 1
UPF0266 membrane protein plu2700 1

Protein length

Unique protein length 152

Protein length distribution