Orthogroup:group_2390


Homologs in group_2390

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19200 FBDBKF_19200 Morganella morganii S1 rpsQ 30S ribosomal protein S17
EHELCC_18945 EHELCC_18945 Morganella morganii S2 rpsQ 30S ribosomal protein S17
NLDBIP_18960 NLDBIP_18960 Morganella morganii S4 rpsQ 30S ribosomal protein S17
LHKJJB_18815 LHKJJB_18815 Morganella morganii S3 rpsQ 30S ribosomal protein S17
HKOGLL_18550 HKOGLL_18550 Morganella morganii S5 rpsQ 30S ribosomal protein S17
F4V73_RS18965 F4V73_RS18965 Morganella psychrotolerans rpsQ 30S ribosomal protein S17
PMI_RS16195 PMI_RS16195 Proteus mirabilis HI4320 rpsQ 30S ribosomal protein S17

Distribution of group_2390 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2390 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2390

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2390.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpsQ 7

Product

# Product Occurence
1 30S ribosomal protein S17 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0186 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein S17

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02961 7 small subunit ribosomal protein S17 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00366 7 Ribosomal protein S17

Annotations of the 530 SwissProt hits

Annotation Number of occurrences
Small ribosomal subunit protein uS17 526
Small ribosomal subunit protein uS17A 1
Small ribosomal subunit protein uS17c 3

Protein length

Unique protein length 84

Protein length distribution