Orthogroup:group_239


Homologs in group_239

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01810 FBDBKF_01810 Morganella morganii S1 appC Cytochrome bd-type quinol oxidase, subunit 1
EHELCC_02280 EHELCC_02280 Morganella morganii S2 appC Cytochrome bd-type quinol oxidase, subunit 1
NLDBIP_01180 NLDBIP_01180 Morganella morganii S4 appC Cytochrome bd-type quinol oxidase, subunit 1
LHKJJB_00855 LHKJJB_00855 Morganella morganii S3 appC Cytochrome bd-type quinol oxidase, subunit 1
HKOGLL_00895 HKOGLL_00895 Morganella morganii S5 appC Cytochrome bd-type quinol oxidase, subunit 1
F4V73_RS04135 F4V73_RS04135 Morganella psychrotolerans - cytochrome ubiquinol oxidase subunit I
PMI_RS06940 PMI_RS06940 Proteus mirabilis HI4320 - cytochrome ubiquinol oxidase subunit I
PMI_RS11760 PMI_RS11760 Proteus mirabilis HI4320 - cytochrome ubiquinol oxidase subunit I

Distribution of group_239 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_239 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_239

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_239.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 appC 5
2 - 3

Product

# Product Occurence
1 Cytochrome bd-type quinol oxidase, subunit 1 5
2 cytochrome ubiquinol oxidase subunit I 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1271 8 C Energy production and conversion (C) Cytochrome bd-type quinol oxidase, subunit 1

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00425 8 cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] Oxidative phosphorylation
Two-component system		 Cytochrome bd ubiquinol oxidase

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01654 8 Cytochrome bd terminal oxidase subunit I

Annotations of the 8 SwissProt hits

Annotation Number of occurrences
Cytochrome bd ubiquinol oxidase subunit 1 2
Cytochrome bd-I ubiquinol oxidase subunit 1 3
Cytochrome bd-II ubiquinol oxidase subunit 1 1
Probable cytochrome oxidase subunit 1 1
Putative cytochrome bd menaquinol oxidase subunit I 1

Protein length

Min length 444
Max length 450
Mean length (sd) 446.2 (1.7)
Median length 446.0

Protein length distribution