COG0015


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0015, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Adenylosuccinate lyase
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG0015 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_254 FBDBKF_03785 159935 161305 -1 purB Adenylosuccinate lyase Morganella morganii S1
1 group_1942 FBDBKF_14570 8072 9439 1 purB adenylosuccinate lyase Morganella morganii S1
2 group_254 EHELCC_06750 85798 87168 1 purB Adenylosuccinate lyase Morganella morganii S2
3 group_1942 EHELCC_15375 38148 39515 1 purB adenylosuccinate lyase Morganella morganii S2
4 group_254 NLDBIP_07075 85671 87041 1 purB Adenylosuccinate lyase Morganella morganii S4
5 group_1942 NLDBIP_15905 38148 39515 1 purB adenylosuccinate lyase Morganella morganii S4
6 group_254 LHKJJB_06610 49417 50787 1 purB Adenylosuccinate lyase Morganella morganii S3
7 group_1942 LHKJJB_15935 77171 78538 -1 purB adenylosuccinate lyase Morganella morganii S3
8 group_254 HKOGLL_04320 182600 183970 -1 purB Adenylosuccinate lyase Morganella morganii S5
9 group_1942 HKOGLL_15055 76383 77750 -1 purB adenylosuccinate lyase Morganella morganii S5
10 group_1942 F4V73_RS07365 1536308 1537675 1 purB adenylosuccinate lyase Morganella psychrotolerans
11 group_254 F4V73_RS11085 355260 356630 1 adenylosuccinate lyase family protein Morganella psychrotolerans
12 group_254 PMI_RS03090 680327 681694 1 purB adenylosuccinate lyase Proteus mirabilis HI4320
13 group_1942 PMI_RS04355 978518 979888 -1 purB adenylosuccinate lyase Proteus mirabilis HI4320
14 group_254 PMI_RS14740 3269739 3271109 -1 adenylosuccinate lyase family protein Proteus mirabilis HI4320