Orthogroup:group_2383


Homologs in group_2383

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19165 FBDBKF_19165 Morganella morganii S1 rplR 50S ribosomal protein L18
EHELCC_18910 EHELCC_18910 Morganella morganii S2 rplR 50S ribosomal protein L18
NLDBIP_18925 NLDBIP_18925 Morganella morganii S4 rplR 50S ribosomal protein L18
LHKJJB_18780 LHKJJB_18780 Morganella morganii S3 rplR 50S ribosomal protein L18
HKOGLL_18515 HKOGLL_18515 Morganella morganii S5 rplR 50S ribosomal protein L18
F4V73_RS19000 F4V73_RS19000 Morganella psychrotolerans rplR 50S ribosomal protein L18
PMI_RS16230 PMI_RS16230 Proteus mirabilis HI4320 rplR 50S ribosomal protein L18

Distribution of group_2383 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2383 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2383

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2383.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rplR 7

Product

# Product Occurence
1 50S ribosomal protein L18 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0256 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L18

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02881 7 large subunit ribosomal protein L18 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00861 7 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast

Annotations of the 549 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein uL18 545
Large ribosomal subunit protein uL18c 4

Protein length

Unique protein length 117

Protein length distribution