K03087


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K03087
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K03087
KO K03087
Description RNA polymerase nonessential primary-like sigma factor

Occurence in the database

K03087 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2383 FBDBKF_18965 11096 12088 -1 rpoS RNA polymerase sigma factor RpoS Morganella morganii S1
1 group_2383 EHELCC_18710 11096 12088 -1 rpoS RNA polymerase sigma factor RpoS Morganella morganii S2
2 group_2383 NLDBIP_18595 13425 14417 1 rpoS RNA polymerase sigma factor RpoS Morganella morganii S4
3 group_2383 LHKJJB_18580 11096 12088 -1 rpoS RNA polymerase sigma factor RpoS Morganella morganii S3
4 group_2383 HKOGLL_18315 11096 12088 -1 rpoS RNA polymerase sigma factor RpoS Morganella morganii S5
5 group_2383 F4V73_RS13875 412519 413520 -1 rpoS RNA polymerase sigma factor RpoS Morganella psychrotolerans
6 group_2383 PMI_RS11015 2425405 2426394 -1 rpoS RNA polymerase sigma factor RpoS Proteus mirabilis HI4320