Orthogroup:group_2371


Homologs in group_2371

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19105 FBDBKF_19105 Morganella morganii S1 arfA Stalled ribosome alternative rescue factor ArfA
EHELCC_18850 EHELCC_18850 Morganella morganii S2 arfA Stalled ribosome alternative rescue factor ArfA
NLDBIP_18865 NLDBIP_18865 Morganella morganii S4 arfA Stalled ribosome alternative rescue factor ArfA
LHKJJB_18720 LHKJJB_18720 Morganella morganii S3 arfA Stalled ribosome alternative rescue factor ArfA
HKOGLL_18455 HKOGLL_18455 Morganella morganii S5 arfA Stalled ribosome alternative rescue factor ArfA
F4V73_RS19060 F4V73_RS19060 Morganella psychrotolerans - ribosome alternative rescue factor ArfA
PMI_RS16285 PMI_RS16285 Proteus mirabilis HI4320 - alternative ribosome-rescue factor A

Distribution of group_2371 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2371 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2371

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2371.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 arfA 5
2 - 2

Product

# Product Occurence
1 Stalled ribosome alternative rescue factor ArfA 5
2 ribosome alternative rescue factor ArfA 1
3 alternative ribosome-rescue factor A 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3036 7 J Translation, ribosomal structure and biogenesis (J) Stalled ribosome alternative rescue factor ArfA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09890 7 alternative ribosome-rescue factor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03889 7 Alternative ribosome-rescue factor A

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
Alternative ribosome-rescue factor A 2

Protein length

Min length 66
Max length 67
Mean length (sd) 66.1 (0.4)
Median length 66.0

Protein length distribution