Orthogroup:group_2355


Homologs in group_2355

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17850 FBDBKF_17850 Morganella morganii S1 lysR DNA-binding transcriptional regulator, LysR family
EHELCC_09875 EHELCC_09875 Morganella morganii S2 lysR DNA-binding transcriptional regulator, LysR family
NLDBIP_10255 NLDBIP_10255 Morganella morganii S4 lysR DNA-binding transcriptional regulator, LysR family
LHKJJB_07500 LHKJJB_07500 Morganella morganii S3 lysR DNA-binding transcriptional regulator, LysR family
HKOGLL_07050 HKOGLL_07050 Morganella morganii S5 lysR DNA-binding transcriptional regulator, LysR family
F4V73_RS15115 F4V73_RS15115 Morganella psychrotolerans - LysR family transcriptional regulator
PMI_RS17745 PMI_RS17745 Proteus mirabilis HI4320 - LysR family transcriptional regulator

Distribution of group_2355 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2355 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2355

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2355.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lysR 5
2 - 2

Product

# Product Occurence
1 DNA-binding transcriptional regulator, LysR family 5
2 LysR family transcriptional regulator 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0583 7 K Transcription (K) DNA-binding transcriptional regulator, LysR family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00126 7 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 7 LysR substrate binding domain

Annotations of the 166 SwissProt hits

Annotation Number of occurrences
AhcY transcriptional activator HvrB 1
Carbapenem-hydrolyzing beta-lactamase transcriptional activator 1
DNA-binding transcriptional dual regulator OxyR 1
Glycine cleavage system transcriptional activator homolog 1
HTH-type transcriptional activator AaeR 3
HTH-type transcriptional activator AllS 11
HTH-type transcriptional activator AmpR 2
HTH-type transcriptional activator BauR 1
HTH-type transcriptional activator CmpR 3
HTH-type transcriptional activator IlvY 1
HTH-type transcriptional activator TtdR 5
HTH-type transcriptional regulator AbgR 1
HTH-type transcriptional regulator AceR 1
HTH-type transcriptional regulator AdmX 1
HTH-type transcriptional regulator AlsR 1
HTH-type transcriptional regulator ArgP 4
HTH-type transcriptional regulator BbuR 1
HTH-type transcriptional regulator BenM 1
HTH-type transcriptional regulator BsdA 1
HTH-type transcriptional regulator CatM 1
HTH-type transcriptional regulator CbbR 3
HTH-type transcriptional regulator CfxR 1
HTH-type transcriptional regulator CitR 1
HTH-type transcriptional regulator CrgA 2
HTH-type transcriptional regulator CynR 2
HTH-type transcriptional regulator CysB 1
HTH-type transcriptional regulator CysL 1
HTH-type transcriptional regulator CzcR 6
HTH-type transcriptional regulator DsdC 1
HTH-type transcriptional regulator GbpR 1
HTH-type transcriptional regulator GltR 1
HTH-type transcriptional regulator HdfR 17
HTH-type transcriptional regulator MetR 7
HTH-type transcriptional regulator PecT 1
HTH-type transcriptional regulator PerR 1
HTH-type transcriptional regulator ShiR 1
HTH-type transcriptional regulator SoxR 1
HTH-type transcriptional regulator TtuA 2
HTH-type transcriptional regulator YhaJ 1
HTH-type transcriptional regulator YofA 2
HTH-type transcriptional regulator YtlI 1
Hydrogen peroxide-inducible genes activator 5
Iron-regulated virulence regulatory protein IrgB 2
Multiple virulence factor regulator MvfR 1
Nitrogen assimilation regulatory protein nac 2
Nodulation protein D 1 1
Nodulation protein D 2 2
PCP degradation transcriptional activation protein 1
Probable HTH-type transcriptional regulator LrhA 2
Probable HTH-type transcriptional regulator LrrA 1
Probable HTH-type transcriptional regulator LtrA 1
Probable HTH-type transcriptional regulator YhaJ 1
Probable RuBisCO transcriptional regulator 14
Probable hydrogen peroxide-inducible genes activator 4
Probable hydrogen peroxide-inducible genes activator (Fragment) 1
Probable nitrogen assimilation transcriptional activator 1
Putative HTH-type transcriptional regulator protein PtxE (Fragment) 1
RuBisCO operon transcriptional regulator 1
Transcriptional dual regulator GltC 1
Uncharacterized HTH-type transcriptional regulator HI_1364 1
Uncharacterized HTH-type transcriptional regulator YafC 1
Uncharacterized HTH-type transcriptional regulator YahB 1
Uncharacterized HTH-type transcriptional regulator YbhD 1
Uncharacterized HTH-type transcriptional regulator YcaN 1
Uncharacterized HTH-type transcriptional regulator YcgK 1
Uncharacterized HTH-type transcriptional regulator YdhB 2
Uncharacterized HTH-type transcriptional regulator YeeY 1
Uncharacterized HTH-type transcriptional regulator YeiE 3
Uncharacterized HTH-type transcriptional regulator YfeR 2
Uncharacterized HTH-type transcriptional regulator YfiE 1
Uncharacterized HTH-type transcriptional regulator YhjC 1
Uncharacterized HTH-type transcriptional regulator YkuM 1
Uncharacterized HTH-type transcriptional regulator YneJ 1
Uncharacterized HTH-type transcriptional regulator YoaU 1
Uncharacterized HTH-type transcriptional regulator YraN 1
Uncharacterized HTH-type transcriptional regulator YvbU 1
Uncharacterized HTH-type transcriptional regulator YwbI 1
Uncharacterized HTH-type transcriptional regulator YwqM 1
Uncharacterized HTH-type transcriptional regulator YxjO 1
Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region 1
Uncharacterized HTH-type transcriptional regulator y4mQ 1
Virulence genes transcriptional activator 1
Virulence genes transcriptional activator SpvR 1

Protein length

Min length 298
Max length 300
Mean length (sd) 298.3 (0.8)
Median length 298.0

Protein length distribution