Orthogroup:group_2338


Homologs in group_2338

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18350 FBDBKF_18350 Morganella morganii S1 smpB SsrA-binding protein SmpB
EHELCC_18385 EHELCC_18385 Morganella morganii S2 smpB SsrA-binding protein SmpB
NLDBIP_18310 NLDBIP_18310 Morganella morganii S4 smpB SsrA-binding protein SmpB
LHKJJB_18505 LHKJJB_18505 Morganella morganii S3 smpB SsrA-binding protein SmpB
HKOGLL_18240 HKOGLL_18240 Morganella morganii S5 smpB SsrA-binding protein SmpB
F4V73_RS01880 F4V73_RS01880 Morganella psychrotolerans smpB SsrA-binding protein SmpB
PMI_RS09405 PMI_RS09405 Proteus mirabilis HI4320 smpB SsrA-binding protein SmpB

Distribution of group_2338 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2338 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2338

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2338.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 smpB 7

Product

# Product Occurence
1 SsrA-binding protein SmpB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0691 7 O Posttranslational modification, protein turnover, chaperones (O) tmRNA-binding protein

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03664 7 SsrA-binding protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01668 7 SmpB protein

Annotations of the 537 SwissProt hits

Annotation Number of occurrences
SsrA-binding protein 537

Protein length

Unique protein length 160

Protein length distribution