Orthogroup:group_2328


Homologs in group_2328

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18110 FBDBKF_18110 Morganella morganii S1 ulaA PTS ascorbate transporter subunit IIC
EHELCC_16810 EHELCC_16810 Morganella morganii S2 ulaA PTS ascorbate transporter subunit IIC
NLDBIP_17640 NLDBIP_17640 Morganella morganii S4 ulaA PTS ascorbate transporter subunit IIC
LHKJJB_17560 LHKJJB_17560 Morganella morganii S3 ulaA PTS ascorbate transporter subunit IIC
HKOGLL_17375 HKOGLL_17375 Morganella morganii S5 ulaA PTS ascorbate transporter subunit IIC
F4V73_RS10315 F4V73_RS10315 Morganella psychrotolerans - PTS ascorbate transporter subunit IIC
PMI_RS08705 PMI_RS08705 Proteus mirabilis HI4320 - PTS ascorbate transporter subunit IIC

Distribution of group_2328 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2328 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2328

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2328.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ulaA 5
2 - 2

Product

# Product Occurence
1 PTS ascorbate transporter subunit IIC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3037 7 G Carbohydrate transport and metabolism (G) Ascorbate-specific PTS system IIC component UlaA

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03611 7 PTS system sugar-specific permease component

Annotations of the 12 SwissProt hits

Annotation Number of occurrences
Ascorbate-specific PTS system EIIC component 12

Protein length

Min length 418
Max length 464
Mean length (sd) 457.4 (17.4)
Median length 464.0

Protein length distribution