Orthogroup:group_232


Homologs in group_232

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01035 FBDBKF_01035 Morganella morganii S1 der ribosome biogenesis GTPase Der
EHELCC_00510 EHELCC_00510 Morganella morganii S2 der ribosome biogenesis GTPase Der
NLDBIP_02950 NLDBIP_02950 Morganella morganii S4 der ribosome biogenesis GTPase Der
LHKJJB_04465 LHKJJB_04465 Morganella morganii S3 der ribosome biogenesis GTPase Der
HKOGLL_02580 HKOGLL_02580 Morganella morganii S5 der ribosome biogenesis GTPase Der
F4V73_RS07110 F4V73_RS07110 Morganella psychrotolerans der ribosome biogenesis GTPase Der
PMI_RS09085 PMI_RS09085 Proteus mirabilis HI4320 der ribosome biogenesis GTPase Der
PMI_RS17345 PMI_RS17345 Proteus mirabilis HI4320 - 50S ribosome-binding GTPase

Distribution of group_232 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_232 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_232

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_232.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 der 7
2 - 1

Product

# Product Occurence
1 ribosome biogenesis GTPase Der 7
2 50S ribosome-binding GTPase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1160 7 J Translation, ribosomal structure and biogenesis (J) Double Era-like domain GTPase Der
COG3596 1 R General function prediction only (R) Predicted GTPase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03977 7 GTPase - -
K06946 1 uncharacterized protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01926 8 50S ribosome-binding GTPase
PF14714 7 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal

Annotations of the 872 SwissProt hits

Annotation Number of occurrences
ATP-binding cassette sub-family C member 4 1
GTP-binding protein At2g22870 1
GTPase Der 560
GTPase Era 89
Probable GTP-binding protein EngB 56
Probable tRNA modification GTPase MnmE 1
Putative uncharacterized protein YeeP 1
Translation initiation factor IF-2 4
Uncharacterized protein YfjP 1
Uncharacterized protein YkfA 1
tRNA modification GTPase MSS1, mitochondrial 1
tRNA modification GTPase MnmE 156

Protein length

Min length 287
Max length 501
Mean length (sd) 473.4 (75.3)
Median length 501.0

Protein length distribution