Orthogroup:group_2316


Homologs in group_2316

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17790 FBDBKF_17790 Morganella morganii S1 prfC peptide chain release factor 3
EHELCC_09815 EHELCC_09815 Morganella morganii S2 prfC peptide chain release factor 3
NLDBIP_10195 NLDBIP_10195 Morganella morganii S4 prfC peptide chain release factor 3
LHKJJB_07560 LHKJJB_07560 Morganella morganii S3 prfC peptide chain release factor 3
HKOGLL_07110 HKOGLL_07110 Morganella morganii S5 prfC peptide chain release factor 3
F4V73_RS15175 F4V73_RS15175 Morganella psychrotolerans prfC peptide chain release factor 3
PMI_RS11980 PMI_RS11980 Proteus mirabilis HI4320 prfC peptide chain release factor 3

Distribution of group_2316 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2316 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2316

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2316.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 prfC 7

Product

# Product Occurence
1 peptide chain release factor 3 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4108 7 J Translation, ribosomal structure and biogenesis (J) Peptide chain release factor RF-3

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02837 7 peptide chain release factor 3 - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00009 7 Elongation factor Tu GTP binding domain
PF16658 7 Class II release factor RF3, C-terminal domain
PF22042 7 Elongation factor G domain 2

Annotations of the 557 SwissProt hits

Annotation Number of occurrences
Elongation factor G 214
Elongation factor G 1 2
Elongation factor G 2 4
Elongation factor G, mitochondrial 31
Elongation factor G-1, mitochondrial 1
Elongation factor G-2, mitochondrial 1
Peptide chain release factor 3 303
Peptide chain release factor RF3 1

Protein length

Unique protein length 529

Protein length distribution