Homologs in group_2281

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17525 FBDBKF_17525 71.5 Morganella morganii S1 dnaG DNA primase (bacterial type)
EHELCC_17420 EHELCC_17420 71.5 Morganella morganii S2 dnaG DNA primase (bacterial type)
NLDBIP_17775 NLDBIP_17775 71.5 Morganella morganii S4 dnaG DNA primase (bacterial type)
LHKJJB_17695 LHKJJB_17695 71.5 Morganella morganii S3 dnaG DNA primase (bacterial type)
HKOGLL_17705 HKOGLL_17705 71.5 Morganella morganii S5 dnaG DNA primase (bacterial type)
F4V73_RS16705 F4V73_RS16705 71.5 Morganella psychrotolerans dnaG DNA primase

Distribution of the homologs in the orthogroup group_2281

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2281

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ABS7 0.0 832 68 1 582 3 dnaG DNA primase Shigella flexneri
P0ABS5 0.0 832 68 1 582 1 dnaG DNA primase Escherichia coli (strain K12)
Q8FDG5 0.0 832 68 1 582 3 dnaG DNA primase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ABS6 0.0 832 68 1 582 3 dnaG DNA primase Escherichia coli O157:H7
P07362 0.0 809 66 1 582 3 dnaG DNA primase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9CLI9 0.0 676 55 5 586 3 dnaG DNA primase Pasteurella multocida (strain Pm70)
Q08346 0.0 647 54 5 576 3 dnaG DNA primase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P32000 0.0 555 45 6 587 3 dnaG DNA primase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57164 0.0 554 45 4 576 3 dnaG DNA primase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89B09 1.11e-174 509 42 2 582 3 dnaG DNA primase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P0A119 1.16e-165 489 41 9 650 3 dnaG DNA primase Pseudomonas putida
P0A118 1.16e-165 489 41 9 650 3 dnaG DNA primase Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q9I5W0 1.89e-164 486 54 5 425 1 dnaG DNA primase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P71481 3.52e-157 465 44 15 588 3 dnaG DNA primase Legionella pneumophila
P57029 7.56e-143 429 43 10 532 3 dnaG DNA primase Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P57028 1.96e-142 427 44 12 533 3 dnaG DNA primase Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P47762 5.09e-88 288 41 5 370 3 dnaG DNA primase Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q9KD44 1.01e-87 286 39 5 367 3 dnaG DNA primase Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P33655 1.07e-86 283 35 6 416 3 dnaG DNA primase Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q92BQ5 4.89e-86 283 41 5 370 3 dnaG DNA primase Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
P05096 6.46e-86 281 38 5 363 1 dnaG DNA primase Bacillus subtilis (strain 168)
Q4UJT0 1.33e-85 281 36 5 411 3 dnaG DNA primase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
P52308 5.72e-85 280 41 5 370 3 dnaG DNA primase Enterococcus faecalis (strain ATCC 700802 / V583)
Q92FZ7 2.45e-84 277 36 5 411 3 dnaG DNA primase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
P50070 1.14e-82 273 37 8 420 3 dnaG DNA primase Myxococcus xanthus
P30103 4.2e-82 271 36 4 405 3 dnaG DNA primase Rickettsia prowazekii (strain Madrid E)
Q1RKH8 1.02e-81 270 33 7 469 3 dnaG DNA primase Rickettsia bellii (strain RML369-C)
Q68VQ4 1.17e-81 270 36 4 405 3 dnaG DNA primase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
P74143 4.63e-80 267 35 9 427 3 dnaG DNA primase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P74893 3.6e-79 266 36 7 415 1 dnaG DNA primase Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q9X4D0 4e-78 261 41 6 363 1 dnaG DNA primase Geobacillus stearothermophilus
Q8CP23 9.48e-76 254 38 6 367 3 dnaG DNA primase Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HNY6 9.48e-76 254 38 6 367 3 dnaG DNA primase Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q9RWR5 1.35e-75 254 42 7 333 3 dnaG DNA primase Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
Q04505 5.76e-71 243 34 9 425 3 dnaG DNA primase Lactococcus lactis subsp. lactis (strain IL1403)
Q9ZN49 1.44e-70 240 35 5 370 3 dnaG DNA primase Helicobacter pylori (strain J99 / ATCC 700824)
P63965 1.78e-70 241 36 7 363 3 dnaG DNA primase Staphylococcus aureus (strain N315)
P63964 1.78e-70 241 36 7 363 1 dnaG DNA primase Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HFJ8 2.16e-70 241 36 7 363 3 dnaG DNA primase Staphylococcus aureus (strain COL)
O05338 2.22e-70 241 36 7 363 1 dnaG DNA primase Staphylococcus aureus
Q6GGD7 2.78e-70 240 36 7 363 3 dnaG DNA primase Staphylococcus aureus (strain MRSA252)
Q6G904 1.27e-69 239 37 7 363 3 dnaG DNA primase Staphylococcus aureus (strain MSSA476)
Q8NWB7 2.06e-69 238 36 7 363 3 dnaG DNA primase Staphylococcus aureus (strain MW2)
P56064 3e-69 236 35 5 370 1 dnaG DNA primase Helicobacter pylori (strain ATCC 700392 / 26695)
Q9S1N4 6.64e-69 238 35 10 436 3 dnaG DNA primase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
O67465 1.32e-67 230 35 7 381 1 dnaG DNA primase Aquifex aeolicus (strain VF5)
Q9X1G3 1.92e-65 226 36 7 373 3 dnaG DNA primase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P9WNW1 2.62e-61 217 32 6 438 1 dnaG DNA primase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WNW0 2.62e-61 217 32 6 438 3 dnaG DNA primase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63963 2.62e-61 217 32 6 438 3 dnaG DNA primase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9PM37 1.39e-60 214 32 7 378 3 dnaG DNA primase Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
O52200 6.29e-60 213 33 9 441 3 dnaG DNA primase Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
O83505 3.56e-59 211 32 6 374 3 dnaG DNA primase Treponema pallidum (strain Nichols)
O51653 1.07e-56 202 29 6 412 3 dnaG DNA primase Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q9Z6W4 2.48e-54 197 32 7 370 3 dnaG DNA primase Chlamydia pneumoniae
Q9PLC9 2.06e-52 192 30 7 411 3 dnaG DNA primase Chlamydia muridarum (strain MoPn / Nigg)
O84799 2.84e-51 189 32 6 358 3 dnaG DNA primase Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9CCG2 4.26e-47 178 31 9 441 3 dnaG DNA primase Mycobacterium leprae (strain TN)
Q98QB3 1.32e-46 176 30 9 373 3 dnaG DNA primase Mycoplasmopsis pulmonis (strain UAB CTIP)
Q9PPZ6 3.81e-42 164 27 10 370 3 dnaG DNA primase Ureaplasma parvum serovar 3 (strain ATCC 700970)
P75426 3.3e-33 137 28 10 365 3 dnaG DNA primase Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P47492 1.37e-26 117 24 13 385 3 dnaG DNA primase Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
O64249 5.65e-06 49 29 1 72 4 58 Gene 58 protein Mycobacterium phage D29
Q05271 9.25e-06 48 34 2 73 4 58 Gene 58 protein Mycobacterium phage L5
O64248 8.62e-05 46 29 5 152 4 57 Gene 57 protein Mycobacterium phage D29
Q05270 0.000518 44 28 5 152 4 57 Gene 57 protein Mycobacterium phage L5

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11725
Feature type CDS
Gene dnaG
Product DNA primase
Location 2589924 - 2591672 (strand: 1)
Length 1749 (nucleotides) / 582 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2281
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01807 CHC2 zinc finger
PF08275 DNA primase catalytic core, N-terminal domain
PF08278 DNA primase DnaG DnaB-binding
PF10410 DnaB-helicase binding domain of primase
PF13155 Toprim-like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0358 Replication, recombination and repair (L) L DNA primase (bacterial type)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02316 DNA primase [EC:2.7.7.101] DNA replication -

Protein Sequence

MAGRIPRSFINDLLARTDIIDLIDARVPLKKQGKNHSACCPFHNEKTPSFTVNSDKQFYHCFGCGAHGNAIDFLMNYDRLDFVETIEELAAMHGLEVPYESGTGSSPIERHIRQNLYQVMEKLNQYYKSTLNTPDAQEARNYLAHRGLSEEVITRFSIGFVPTGWDNILKRFGQNPDNQALLLEAGMVITNDKGRTYDRFRQRVMFPIRDRRGRVIAFGGRVLGDDLPKYLNSPETEIFHKGRQLYGLYEAQHTHPNPAKLLVVEGYMDVVALAQFGIDYAVASLGTSTTAEHIQLLFRTTDNVICCYDGDRAGRDAAWRALETALPFLNDGRSLRFMFLPEGDDPDSLVRREGKEAFEKRMEQAHSLSEFLFDSLVPQVDLSTQEGNGKLYSLARPLIDQIPSETLRLYLLRELGNLTGNPDIEQMDRLFGRNSLHHETSYQPTKLRTTPMRILIALLIQNPEFCQLVPPLEGLNTEKIAGLSLFIELVSLCQAQPGLNTGQIIELYRENKFGKQLEKLAMWNDIDIDEIAEKTFTDTLDHLFLTAMDERLNALIAKERTEGLTQNEREEVQLIIQARVKK

Flanking regions ( +/- flanking 50bp)

CTTATGAGAGCGCGGCTTATTCTCGTTCAACAACAGGCGTAAAAGGGCTTATGGCTGGACGAATTCCACGTTCATTTATCAATGATTTATTAGCACGAACCGATATCATCGATCTTATCGACGCTCGTGTGCCGCTTAAAAAACAAGGCAAAAATCATTCAGCGTGTTGTCCGTTTCATAATGAAAAAACGCCCTCTTTTACAGTAAATAGCGACAAACAGTTTTATCACTGTTTTGGTTGCGGTGCGCATGGCAATGCTATTGATTTTTTGATGAACTACGACAGACTTGATTTTGTCGAAACCATTGAAGAGTTAGCAGCAATGCATGGGTTAGAAGTTCCTTATGAATCAGGAACTGGCAGTAGCCCGATTGAGCGACATATAAGACAAAATCTCTATCAAGTGATGGAGAAATTGAATCAGTATTACAAAAGCACCCTCAATACCCCTGACGCTCAGGAAGCAAGAAATTATCTTGCGCATCGCGGGCTAAGTGAAGAGGTTATTACCCGCTTTTCTATCGGCTTTGTACCTACGGGTTGGGACAATATCCTAAAACGTTTTGGGCAAAATCCCGATAATCAAGCCCTGTTACTTGAAGCAGGAATGGTAATAACAAACGATAAAGGTCGCACTTATGACCGTTTTCGTCAGCGCGTTATGTTTCCGATTAGAGACAGACGAGGTCGTGTTATTGCATTTGGTGGACGTGTATTAGGTGATGATTTACCCAAATACTTAAACTCCCCAGAAACAGAGATTTTCCATAAAGGCCGCCAACTTTACGGGCTTTATGAAGCACAACACACTCACCCTAACCCAGCTAAGTTATTAGTGGTTGAAGGTTATATGGATGTTGTGGCATTAGCGCAGTTTGGTATTGATTATGCTGTCGCCTCGTTGGGTACATCAACAACCGCAGAGCATATCCAGTTGCTGTTTAGAACTACGGATAACGTTATTTGCTGCTATGATGGTGATAGAGCAGGACGAGATGCCGCATGGCGAGCATTAGAAACTGCACTGCCTTTTTTAAACGATGGCCGTTCTTTACGTTTTATGTTTTTACCTGAAGGCGATGATCCTGATTCACTGGTTCGCCGCGAAGGGAAAGAGGCATTTGAAAAACGAATGGAACAAGCACACTCTTTATCTGAGTTTTTATTTGATTCGCTGGTTCCACAAGTGGATTTGAGCACCCAAGAAGGCAATGGCAAACTCTATAGTTTAGCGCGCCCATTAATTGATCAGATCCCAAGTGAGACTTTACGTCTATATTTATTAAGAGAGCTTGGAAATTTAACGGGAAATCCCGATATTGAGCAGATGGATCGTTTATTTGGTAGAAACTCGCTACATCACGAAACATCGTATCAACCGACAAAACTACGTACTACACCAATGCGTATTTTAATTGCCTTGTTGATACAAAATCCCGAGTTTTGCCAATTAGTGCCACCGCTTGAGGGGCTAAATACAGAAAAAATAGCGGGTTTATCGCTTTTTATTGAATTAGTTTCTCTTTGCCAAGCGCAGCCAGGCTTGAATACAGGTCAGATTATCGAACTCTATCGAGAGAATAAATTCGGTAAACAACTTGAAAAACTGGCGATGTGGAACGATATAGATATAGATGAGATAGCTGAAAAAACATTTACAGATACGTTAGATCATCTCTTTTTAACCGCAATGGATGAACGTTTAAACGCCCTCATTGCCAAAGAGAGAACTGAAGGTCTAACACAAAATGAACGCGAAGAAGTCCAATTGATAATACAGGCTCGCGTTAAAAAGTAAAACCTAAATTAAGATTAAAAACACGGCTTAATTGCCGCTATCGGTAGGTA