Homologs in group_2281

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17525 FBDBKF_17525 100.0 Morganella morganii S1 dnaG DNA primase (bacterial type)
EHELCC_17420 EHELCC_17420 100.0 Morganella morganii S2 dnaG DNA primase (bacterial type)
NLDBIP_17775 NLDBIP_17775 100.0 Morganella morganii S4 dnaG DNA primase (bacterial type)
LHKJJB_17695 LHKJJB_17695 100.0 Morganella morganii S3 dnaG DNA primase (bacterial type)
F4V73_RS16705 F4V73_RS16705 94.8 Morganella psychrotolerans dnaG DNA primase
PMI_RS11725 PMI_RS11725 71.5 Proteus mirabilis HI4320 dnaG DNA primase

Distribution of the homologs in the orthogroup group_2281

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2281

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ABS7 0.0 838 69 1 574 3 dnaG DNA primase Shigella flexneri
P0ABS5 0.0 838 69 1 574 1 dnaG DNA primase Escherichia coli (strain K12)
P0ABS6 0.0 838 69 1 574 3 dnaG DNA primase Escherichia coli O157:H7
Q8FDG5 0.0 837 69 1 574 3 dnaG DNA primase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P07362 0.0 801 66 1 574 3 dnaG DNA primase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9CLI9 0.0 655 55 5 584 3 dnaG DNA primase Pasteurella multocida (strain Pm70)
Q08346 0.0 630 53 3 575 3 dnaG DNA primase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57164 0.0 556 45 4 572 3 dnaG DNA primase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P32000 0.0 551 44 2 571 3 dnaG DNA primase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89B09 0.0 530 42 2 571 3 dnaG DNA primase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q9I5W0 3.1e-163 484 54 4 425 1 dnaG DNA primase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0A119 7.08e-158 470 51 5 450 3 dnaG DNA primase Pseudomonas putida
P0A118 7.08e-158 470 51 5 450 3 dnaG DNA primase Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P71481 9.06e-153 454 43 10 582 3 dnaG DNA primase Legionella pneumophila
P57028 9.88e-148 442 45 12 521 3 dnaG DNA primase Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P57029 2.85e-144 433 44 13 521 3 dnaG DNA primase Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9KD44 1.02e-91 297 41 4 362 3 dnaG DNA primase Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P33655 5.33e-88 287 40 6 372 3 dnaG DNA primase Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
P47762 1.46e-87 287 42 7 373 3 dnaG DNA primase Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q92BQ5 2.12e-87 287 37 9 448 3 dnaG DNA primase Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
P52308 2.86e-87 286 41 4 373 3 dnaG DNA primase Enterococcus faecalis (strain ATCC 700802 / V583)
P05096 1.28e-86 284 33 8 502 1 dnaG DNA primase Bacillus subtilis (strain 168)
Q4UJT0 6.69e-83 274 33 6 465 3 dnaG DNA primase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q9X4D0 9.62e-82 271 39 7 449 1 dnaG DNA primase Geobacillus stearothermophilus
Q92FZ7 1.8e-81 270 36 4 389 3 dnaG DNA primase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
P30103 3.09e-79 264 33 3 434 3 dnaG DNA primase Rickettsia prowazekii (strain Madrid E)
Q68VQ4 8.92e-79 263 36 3 388 3 dnaG DNA primase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q1RKH8 4.31e-78 261 32 6 462 3 dnaG DNA primase Rickettsia bellii (strain RML369-C)
P74143 1.18e-77 261 35 7 424 3 dnaG DNA primase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P74893 1.41e-77 262 38 8 402 1 dnaG DNA primase Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P50070 5.64e-76 256 37 10 427 3 dnaG DNA primase Myxococcus xanthus
Q9RWR5 9.32e-76 254 45 11 330 3 dnaG DNA primase Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
Q8CP23 2.24e-72 246 37 5 359 3 dnaG DNA primase Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HNY6 2.24e-72 246 37 5 359 3 dnaG DNA primase Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
O05338 2e-71 244 37 4 358 1 dnaG DNA primase Staphylococcus aureus
Q5HFJ8 2.05e-71 244 37 4 358 3 dnaG DNA primase Staphylococcus aureus (strain COL)
P63965 2.46e-71 244 37 4 358 3 dnaG DNA primase Staphylococcus aureus (strain N315)
P63964 2.46e-71 244 37 4 358 1 dnaG DNA primase Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q6GGD7 2.66e-71 243 37 4 358 3 dnaG DNA primase Staphylococcus aureus (strain MRSA252)
O67465 8.13e-71 239 35 6 388 1 dnaG DNA primase Aquifex aeolicus (strain VF5)
Q6G904 1.98e-70 241 37 4 358 3 dnaG DNA primase Staphylococcus aureus (strain MSSA476)
Q8NWB7 2.22e-70 241 37 4 358 3 dnaG DNA primase Staphylococcus aureus (strain MW2)
Q04505 2.74e-68 236 33 8 429 3 dnaG DNA primase Lactococcus lactis subsp. lactis (strain IL1403)
P56064 3.13e-68 234 38 4 318 1 dnaG DNA primase Helicobacter pylori (strain ATCC 700392 / 26695)
Q9S1N4 4.26e-68 236 33 12 496 3 dnaG DNA primase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q9ZN49 8.66e-68 233 38 4 318 3 dnaG DNA primase Helicobacter pylori (strain J99 / ATCC 700824)
Q9X1G3 1.25e-65 227 34 6 393 3 dnaG DNA primase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
O52200 1.53e-64 226 30 11 566 3 dnaG DNA primase Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
O51653 9.19e-63 219 29 7 464 3 dnaG DNA primase Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
P9WNW1 9.97e-62 219 31 9 483 1 dnaG DNA primase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WNW0 9.97e-62 219 31 9 483 3 dnaG DNA primase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63963 9.97e-62 219 31 9 483 3 dnaG DNA primase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9PM37 1.45e-59 212 28 13 519 3 dnaG DNA primase Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
O83505 2.52e-59 211 30 5 422 3 dnaG DNA primase Treponema pallidum (strain Nichols)
Q9PLC9 7.84e-55 199 30 9 435 3 dnaG DNA primase Chlamydia muridarum (strain MoPn / Nigg)
Q9Z6W4 2.53e-54 197 30 9 449 3 dnaG DNA primase Chlamydia pneumoniae
O84799 1.93e-51 189 32 8 382 3 dnaG DNA primase Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9CCG2 8.11e-46 174 35 3 303 3 dnaG DNA primase Mycobacterium leprae (strain TN)
Q9PPZ6 1.84e-44 171 25 10 401 3 dnaG DNA primase Ureaplasma parvum serovar 3 (strain ATCC 700970)
Q98QB3 3.16e-44 169 29 6 355 3 dnaG DNA primase Mycoplasmopsis pulmonis (strain UAB CTIP)
P75426 3.94e-31 132 27 9 367 3 dnaG DNA primase Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P47492 3.29e-29 125 23 15 489 3 dnaG DNA primase Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
O64249 6.97e-07 52 35 0 59 4 58 Gene 58 protein Mycobacterium phage D29
Q05271 7.69e-07 52 37 0 58 4 58 Gene 58 protein Mycobacterium phage L5
Q12V67 8.51e-07 55 24 10 303 3 dnaG DNA primase DnaG Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Q05270 0.000108 46 26 6 152 4 57 Gene 57 protein Mycobacterium phage L5

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_17705
Feature type CDS
Gene dnaG
Product DNA primase (bacterial type)
Location 2561 - 4360 (strand: -1)
Length 1800 (nucleotides) / 599 (amino acids)

Contig

Accession ZDB_702
Length 42793 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2281
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01807 CHC2 zinc finger
PF08275 DNA primase catalytic core, N-terminal domain
PF08278 DNA primase DnaG DnaB-binding
PF10410 DnaB-helicase binding domain of primase
PF13155 Toprim-like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0358 Replication, recombination and repair (L) L DNA primase (bacterial type)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02316 DNA primase [EC:2.7.7.101] DNA replication -

Protein Sequence

MAVFPEGSAAYYRYQTGEKGVMAGRIPRTFINDLLARTDIIDLIDVRVPLKKHGKNHQACCPFHNEKTPSFTVSSDKQFYHCFGCGAHGNAIDFLINYDRLEFVEAIEELAAMHGLDVPYETGSGSSQIEKHQRQNLYQLMEKLDSFYRHALQADNAGHAREYLNRRGLSQEIISRFAIGYAPAGWDNVLKRFARSEDDRQQLLDAGMLVVNDNGRCYDRFRERVMFPIRDRRGRVIAFGGRVLDDALPKYLNSPETDIFHKGRQLFGLYEAQQNNRELSRILVVEGYMDVVALAQFGIDYAVASLGTSTTAEHIQLLYRTSDTIICCYDGDRAGREAAWRALETALPHLNDGRQLRFMFLPDGDDPDSLVRREGREAFEQRQNEAHSLSQFLFDTLLRQVDMSTPEGRSKLNALAMPLISRVPGEAQQAFLLQDLGNLLGLPDITQLKQAVRQSENSPGYQAPKLKPTTMRILIALLVQNPQFAQLVPPLESIDTSRIAGFSLFRELIDTCLSQPGLTTGQLLEHYRDNKLAPQLEKLAGWNDIEIDEIAEKTFKDALNHLVVSALNDRFNFLIAKERTEGLTPEERNEVSLLVRVRQ

Flanking regions ( +/- flanking 50bp)

AATCGCTGCGGCCGCGCCGCAACTTAGTCAGACCGCAGTAGTTGCAGTTAATGGCCGTGTTTCCGGAAGGAAGCGCGGCTTATTATCGTTATCAGACAGGCGAAAAAGGGGTTATGGCCGGGCGCATTCCACGCACATTTATCAACGACTTATTAGCGAGAACCGATATCATCGATCTTATCGATGTCAGGGTGCCGCTGAAAAAACACGGTAAAAATCACCAGGCGTGTTGTCCTTTCCACAACGAAAAAACTCCCTCTTTTACAGTCAGCAGCGATAAACAGTTTTACCACTGCTTCGGCTGTGGTGCCCACGGCAATGCTATTGATTTTTTAATTAATTATGACCGGCTCGAGTTTGTCGAGGCGATCGAAGAATTAGCAGCAATGCACGGGCTGGATGTTCCTTATGAAACCGGAAGCGGCAGCAGCCAGATAGAAAAACATCAGCGCCAGAACCTGTATCAGCTGATGGAAAAACTGGACAGCTTTTACCGCCACGCATTACAGGCTGATAACGCCGGTCATGCCCGTGAGTACCTGAACCGCCGGGGTCTGAGTCAGGAAATTATCAGCCGGTTTGCAATCGGCTATGCCCCCGCCGGATGGGACAACGTTCTCAAACGCTTTGCCCGCAGTGAGGATGATCGTCAGCAGTTGCTGGATGCCGGCATGTTAGTGGTCAATGATAACGGCCGCTGCTATGACCGTTTCCGGGAACGTGTGATGTTTCCTATCCGTGACCGGCGCGGCCGGGTAATTGCCTTCGGCGGACGTGTTCTTGATGACGCACTGCCGAAATACCTGAACTCACCGGAAACCGATATTTTTCATAAGGGCCGCCAGTTATTCGGGCTGTATGAAGCCCAGCAGAATAACCGCGAACTGTCCCGCATCCTTGTGGTGGAAGGCTATATGGATGTGGTTGCCCTGGCGCAGTTCGGTATTGATTATGCGGTGGCCTCACTCGGGACATCGACAACGGCAGAGCACATACAGTTGCTCTATCGGACATCTGATACCATAATTTGTTGTTATGACGGAGACCGCGCCGGACGTGAAGCCGCCTGGCGGGCACTCGAAACTGCTCTTCCCCATCTTAATGACGGGCGGCAGCTTCGTTTTATGTTTTTACCGGACGGCGATGATCCGGATTCACTGGTGCGCCGCGAAGGCCGTGAAGCCTTTGAGCAGCGGCAGAATGAGGCACACAGTCTGTCTCAGTTTCTGTTCGATACCCTGCTGCGCCAGGTGGATATGAGCACCCCGGAGGGGCGCAGCAAGCTGAATGCCCTGGCGATGCCGCTGATAAGCCGCGTGCCGGGTGAAGCGCAACAGGCGTTTTTATTGCAGGATCTGGGCAATTTACTCGGATTACCGGATATCACGCAGCTCAAACAGGCGGTCCGCCAGAGTGAAAACAGTCCCGGTTATCAGGCTCCGAAACTGAAACCGACCACCATGCGGATCCTGATTGCCCTGCTGGTGCAGAATCCGCAGTTTGCACAATTAGTGCCGCCGCTGGAATCCATTGATACCAGCCGTATTGCCGGTTTTTCATTATTCAGGGAGCTGATTGATACCTGTTTATCACAGCCCGGGCTGACCACCGGTCAGTTACTGGAACACTACCGTGATAATAAATTAGCGCCACAGCTTGAAAAACTGGCCGGATGGAACGATATAGAGATAGATGAGATAGCAGAAAAAACCTTCAAAGATGCCTTAAATCATCTGGTGGTATCTGCTCTCAATGACAGATTTAACTTCCTGATCGCCAAAGAGCGGACAGAAGGTCTGACCCCTGAAGAGCGCAATGAAGTGAGTCTTCTCGTGCGGGTCCGGCAATAAGTATTATTATTAAACTATGATGAATATAACGGCTTAAGTGCCGCAGACAG