Orthogroup:group_2296


Homologs in group_2296

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17635 FBDBKF_17635 Morganella morganii S1 thiC phosphomethylpyrimidine synthase ThiC
EHELCC_18120 EHELCC_18120 Morganella morganii S2 thiC phosphomethylpyrimidine synthase ThiC
NLDBIP_18030 NLDBIP_18030 Morganella morganii S4 thiC phosphomethylpyrimidine synthase ThiC
LHKJJB_18225 LHKJJB_18225 Morganella morganii S3 thiC phosphomethylpyrimidine synthase ThiC
HKOGLL_17975 HKOGLL_17975 Morganella morganii S5 thiC phosphomethylpyrimidine synthase ThiC
F4V73_RS15015 F4V73_RS15015 Morganella psychrotolerans thiC phosphomethylpyrimidine synthase ThiC
PMI_RS13715 PMI_RS13715 Proteus mirabilis HI4320 thiC phosphomethylpyrimidine synthase ThiC

Distribution of group_2296 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2296 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2296

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2296.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 thiC 7

Product

# Product Occurence
1 phosphomethylpyrimidine synthase ThiC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0422 7 H Coenzyme transport and metabolism (H) 4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01964 7 Radical SAM ThiC family
PF13667 7 ThiC-associated domain

Annotations of the 447 SwissProt hits

Annotation Number of occurrences
5-hydroxybenzimidazole synthase 4
5-hydroxybenzimidazole synthase BzaA 2
5-hydroxybenzimidazole synthase BzaB 2
Phosphomethylpyrimidine synthase 423
Phosphomethylpyrimidine synthase 1 7
Phosphomethylpyrimidine synthase 2 7
Phosphomethylpyrimidine synthase, chloroplastic 1
Thiamine biosynthesis bifunctional protein ThiEC 1

Protein length

Min length 649
Max length 650
Mean length (sd) 649.3 (0.5)
Median length 649.0

Protein length distribution