Orthogroup:group_2272



Homologs in group_2272

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17475 FBDBKF_17475 Morganella morganii S1 yedF sulfurtransferase-like selenium metabolism protein YedF
EHELCC_17370 EHELCC_17370 Morganella morganii S2 yedF sulfurtransferase-like selenium metabolism protein YedF
NLDBIP_17825 NLDBIP_17825 Morganella morganii S4 yedF sulfurtransferase-like selenium metabolism protein YedF
LHKJJB_17745 LHKJJB_17745 Morganella morganii S3 yedF sulfurtransferase-like selenium metabolism protein YedF
HKOGLL_17755 HKOGLL_17755 Morganella morganii S5 yedF sulfurtransferase-like selenium metabolism protein YedF
F4V73_RS16650 F4V73_RS16650 Morganella psychrotolerans yedF sulfurtransferase-like selenium metabolism protein YedF
PMI_RS00205 PMI_RS00205 Proteus mirabilis HI4320 yedF sulfurtransferase-like selenium metabolism protein YedF

Distribution of group_2272 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2272 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2272

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2272.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yedF 7

Product

# Product Occurence
1 sulfurtransferase-like selenium metabolism protein YedF 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0425 7 JHO Translation, ribosomal structure and biogenesis (J)
Coenzyme transport and metabolism (H)
Posttranslational modification, protein turnover, chaperones (O)
Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04085 7 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] Sulfur relay system -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01206 7 Sulfurtransferase TusA

Annotations of the 102 SwissProt hits

Annotation Number of occurrences
Putative sulfur carrier protein AF_0188 1
Putative sulfur carrier protein AF_0554 1
Putative sulfur carrier protein MJ0990 1
Putative sulfur carrier protein TM_0983 1
Putative sulfur carrier protein TsuB 1
Putative sulfur carrier protein VNG_5061C/VNG_5236C/VNG_6059C/VNG_6467C 1
Putative sulfur carrier protein YedF 6
Putative sulfur carrier protein YrkF 1
Putative sulfur carrier protein YrkI 1
Putative sulfur carrier protein aq_1421 1
Sulfur carrier protein TusA 87

Protein length

Min length 80
Max length 81
Mean length (sd) 80.9 (0.4)
Median length 81.0

Protein length distribution