COG1237


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1237, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Metal-dependent hydrolase, beta-lactamase superfamily II
Function(s) descr. General function prediction only (R)

Occurence in the database

COG1237 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2236 FBDBKF_17125 10633 11439 -1 Metal-dependent hydrolase, beta-lactamase superfamily II Morganella morganii S1
1 group_2236 EHELCC_01765 344062 344868 1 Metal-dependent hydrolase, beta-lactamase superfamily II Morganella morganii S2
2 group_2236 NLDBIP_01695 335268 336074 -1 Metal-dependent hydrolase, beta-lactamase superfamily II Morganella morganii S4
3 group_2236 LHKJJB_00340 56611 57417 1 Metal-dependent hydrolase, beta-lactamase superfamily II Morganella morganii S3
4 group_2236 HKOGLL_00380 62122 62928 1 Metal-dependent hydrolase, beta-lactamase superfamily II Morganella morganii S5
5 group_2236 F4V73_RS05885 1255082 1255888 -1 MBL fold metallo-hydrolase Morganella psychrotolerans
6 group_2236 PMI_RS07870 1721930 1722748 -1 MBL fold metallo-hydrolase Proteus mirabilis HI4320