Orthogroup:group_222


Homologs in group_222

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00405 FBDBKF_00405 Morganella morganii S1 nrdB class Ia ribonucleoside-diphosphate reductase subunit beta
EHELCC_01140 EHELCC_01140 Morganella morganii S2 nrdB class Ia ribonucleoside-diphosphate reductase subunit beta
NLDBIP_02320 NLDBIP_02320 Morganella morganii S4 nrdB class Ia ribonucleoside-diphosphate reductase subunit beta
LHKJJB_03835 LHKJJB_03835 Morganella morganii S3 nrdB class Ia ribonucleoside-diphosphate reductase subunit beta
HKOGLL_03210 HKOGLL_03210 Morganella morganii S5 nrdB class Ia ribonucleoside-diphosphate reductase subunit beta
F4V73_RS06385 F4V73_RS06385 Morganella psychrotolerans nrdB class Ia ribonucleoside-diphosphate reductase subunit beta
F4V73_RS17905 F4V73_RS17905 Morganella psychrotolerans nrdB class Ia ribonucleoside-diphosphate reductase subunit beta
PMI_RS08515 PMI_RS08515 Proteus mirabilis HI4320 nrdB class Ia ribonucleoside-diphosphate reductase subunit beta

Distribution of group_222 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_222 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_222

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_222.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nrdB 8

Product

# Product Occurence
1 class Ia ribonucleoside-diphosphate reductase subunit beta 8

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0208 8 F Nucleotide transport and metabolism (F) Ribonucleotide reductase beta subunit, ferritin-like domain

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00268 8 Ribonucleotide reductase, small chain

Annotations of the 75 SwissProt hits

Annotation Number of occurrences
Probable ribonucleoside-diphosphate reductase small subunit 048L 1
Probable ribonucleoside-diphosphate reductase small subunit 376L 1
Putative ribonucleoside-diphosphate reductase small subunit 067L 1
Ribonucleoside-diphosphate reductase 1 subunit beta 3
Ribonucleoside-diphosphate reductase 2 subunit beta 2
Ribonucleoside-diphosphate reductase small chain 25
Ribonucleoside-diphosphate reductase small chain 1 1
Ribonucleoside-diphosphate reductase small chain A 1
Ribonucleoside-diphosphate reductase small chain B 1
Ribonucleoside-diphosphate reductase small chain C 1
Ribonucleoside-diphosphate reductase small subunit 3
Ribonucleoside-diphosphate reductase subunit M2 7
Ribonucleoside-diphosphate reductase subunit M2 B 4
Ribonucleoside-diphosphate reductase subunit beta 19
Ribonucleoside-diphosphate reductase subunit beta nrdF1 2
Ribonucleoside-diphosphate reductase subunit beta nrdF2 2
SPbeta prophage-derived ribonucleoside-diphosphate reductase subunit beta 1

Protein length

Min length 373
Max length 376
Mean length (sd) 375.6 (1.1)
Median length 376.0

Protein length distribution