COG4150


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4150, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type sulfate transport system, periplasmic component
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG4150 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_231 FBDBKF_00995 180806 181822 -1 cysP ABC-type sulfate transport system, periplasmic component Morganella morganii S1
1 group_231 EHELCC_00550 127046 128062 1 cysP ABC-type sulfate transport system, periplasmic component Morganella morganii S2
2 group_231 NLDBIP_02910 552074 553090 -1 cysP ABC-type sulfate transport system, periplasmic component Morganella morganii S4
3 group_231 LHKJJB_04425 159315 160331 -1 cysP ABC-type sulfate transport system, periplasmic component Morganella morganii S3
4 group_231 HKOGLL_02620 127251 128267 1 cysP ABC-type sulfate transport system, periplasmic component Morganella morganii S5
5 group_231 F4V73_RS07070 1467302 1468318 -1 cysP thiosulfate ABC transporter substrate-binding protein CysP Morganella psychrotolerans
6 group_231 PMI_RS09055 1972411 1973442 -1 cysP thiosulfate ABC transporter substrate-binding protein CysP Proteus mirabilis HI4320