Homologs in group_231

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00995 FBDBKF_00995 84.9 Morganella morganii S1 cysP ABC-type sulfate transport system, periplasmic component
EHELCC_00550 EHELCC_00550 84.9 Morganella morganii S2 cysP ABC-type sulfate transport system, periplasmic component
NLDBIP_02910 NLDBIP_02910 84.9 Morganella morganii S4 cysP ABC-type sulfate transport system, periplasmic component
LHKJJB_04425 LHKJJB_04425 84.9 Morganella morganii S3 cysP ABC-type sulfate transport system, periplasmic component
HKOGLL_02620 HKOGLL_02620 84.9 Morganella morganii S5 cysP ABC-type sulfate transport system, periplasmic component
PMI_RS09055 PMI_RS09055 66.8 Proteus mirabilis HI4320 cysP thiosulfate ABC transporter substrate-binding protein CysP
PMI_RS15845 PMI_RS15845 43.7 Proteus mirabilis HI4320 - sulfate ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_231

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_231

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P41031 9.08e-148 422 64 0 317 3 cysP Thiosulfate-binding protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P16700 4.29e-147 421 63 0 317 1 cysP Thiosulfate-binding protein Escherichia coli (strain K12)
Q9I3L9 2.06e-93 284 46 2 307 1 cysP Thiosulfate-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0AG79 4.36e-88 270 41 2 322 3 sbp Sulfate-binding protein Shigella flexneri
P0AG78 4.36e-88 270 41 2 322 1 sbp Sulfate-binding protein Escherichia coli (strain K12)
P02906 5.7e-87 267 41 2 322 1 sbp Sulfate-binding protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q01903 1.03e-45 162 29 5 312 2 sbpA Sulfate-binding protein Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P27366 2.52e-44 158 30 6 313 2 sbpA Sulfate-binding protein Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q9G4F5 1.01e-06 53 37 1 64 3 CYSA Sulfate/thiosulfate import ATP-binding protein cysA Cucumis sativus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07070
Feature type CDS
Gene cysP
Product thiosulfate ABC transporter substrate-binding protein CysP
Location 1467302 - 1468318 (strand: -1)
Length 1017 (nucleotides) / 338 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_231
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF13531 Bacterial extracellular solute-binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4150 Inorganic ion transport and metabolism (P) P ABC-type sulfate transport system, periplasmic component

Protein Sequence

MKQFPKTVLPAGLLILTTLLSGAASAAQLLNSSYDIARELFTELNPLFEKQWNTAHPDDPLTIRQSHGGSSKQALAILQGLRADVVTYNQVTDVQVLHDKGQLLAADWQSRLANNSSPYYSTMAFLVRKGNPKQITDWDSLLRGDVKIVFPNPKTSGNGRYTYLAAEGFWQQKNGKNSPETTKNMAKFLSHVAVFDTGGRGATTSFIERGLGDVLISFESEVNNIRREYGEDDYDVIVPPFNILAEFPVARIDKNTERNGTQAVADAYLAFLYSPAAQEKMMQSNYRVTDAGIMAANKARFPPVRLFRVETQFGPWAQVMETRFNSGGEFDTLMAQGR

Flanking regions ( +/- flanking 50bp)

CAAACTGGCTAGAGTAATCCGTACTTGTCATCACAATAAGGAATGTCGCCGTGAAACAGTTCCCGAAAACGGTATTACCCGCTGGTTTGCTGATACTGACCACACTATTGAGCGGGGCCGCCAGCGCCGCACAACTGCTGAACAGCTCCTATGATATTGCCCGCGAACTGTTTACTGAACTGAATCCGCTGTTTGAAAAACAGTGGAATACGGCGCATCCGGATGATCCCCTGACTATCCGTCAGTCTCACGGCGGCTCCTCAAAACAGGCGCTGGCGATTTTGCAGGGTCTGCGGGCGGATGTGGTGACATACAACCAGGTCACTGATGTTCAGGTGCTGCATGACAAAGGGCAACTGCTTGCGGCGGACTGGCAGTCCCGCCTGGCGAATAACAGCTCACCTTATTATTCCACCATGGCGTTTCTGGTGCGCAAGGGAAACCCGAAACAGATAACGGACTGGGATTCCCTGCTGCGTGGTGATGTGAAAATTGTCTTTCCTAATCCGAAAACCTCCGGTAACGGGCGTTACACCTATCTGGCGGCAGAAGGCTTCTGGCAGCAGAAAAACGGAAAAAACAGCCCGGAAACCACAAAGAATATGGCAAAATTTCTCAGTCATGTGGCGGTATTTGACACCGGTGGGCGGGGAGCGACCACCTCATTTATTGAACGCGGGCTGGGTGATGTGCTGATAAGCTTTGAATCTGAAGTAAATAATATACGCCGTGAATATGGCGAAGATGATTATGATGTCATCGTGCCGCCGTTTAATATCCTGGCGGAATTTCCGGTTGCCCGTATAGATAAAAACACCGAACGCAATGGCACACAGGCAGTTGCGGATGCCTATCTGGCCTTTTTATACAGCCCGGCAGCGCAGGAAAAAATGATGCAATCTAACTACCGCGTGACAGACGCGGGAATTATGGCGGCAAACAAAGCGCGTTTCCCGCCGGTCAGGTTGTTCCGTGTTGAAACGCAGTTCGGTCCCTGGGCGCAGGTGATGGAAACCAGGTTTAATTCAGGCGGTGAATTCGATACGCTGATGGCACAAGGCCGCTGATATGTCGCGGCGGGTTTTACCGGGTTTCGGGCTTTCCCTTGGCTTTACGC