Orthogroup:group_2216


Homologs in group_2216

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16935 FBDBKF_16935 Morganella morganii S1 ubiJ Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain
EHELCC_16655 EHELCC_16655 Morganella morganii S2 ubiJ Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain
NLDBIP_16865 NLDBIP_16865 Morganella morganii S4 ubiJ Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain
LHKJJB_16605 LHKJJB_16605 Morganella morganii S3 ubiJ Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain
HKOGLL_17570 HKOGLL_17570 Morganella morganii S5 ubiJ Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain
F4V73_RS18405 F4V73_RS18405 Morganella psychrotolerans - SCP2 sterol-binding domain-containing protein
PMI_RS17580 PMI_RS17580 Proteus mirabilis HI4320 - SCP2 domain-containing protein

Distribution of group_2216 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2216 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2216

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2216.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ubiJ 5
2 - 2

Product

# Product Occurence
1 Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain 5
2 SCP2 sterol-binding domain-containing protein 1
3 SCP2 domain-containing protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3165 7 H Coenzyme transport and metabolism (H) Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03690 7 ubiquinone biosynthesis accessory factor UbiJ - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02036 7 SCP-2 sterol transfer family

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Ubiquinone biosynthesis accessory factor UbiJ 3

Protein length

Min length 213
Max length 224
Mean length (sd) 222.4 (4.2)
Median length 224.0

Protein length distribution