Orthogroup:group_2164



Homologs in group_2164

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16280 FBDBKF_16280 Morganella morganii S1 waaA lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
EHELCC_16315 EHELCC_16315 Morganella morganii S2 waaA lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
NLDBIP_17025 NLDBIP_17025 Morganella morganii S4 waaA lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
LHKJJB_16945 LHKJJB_16945 Morganella morganii S3 waaA lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
HKOGLL_16895 HKOGLL_16895 Morganella morganii S5 waaA lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
F4V73_RS17310 F4V73_RS17310 Morganella psychrotolerans waaA lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
PMI_RS15660 PMI_RS15660 Proteus mirabilis HI4320 waaA lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase

Distribution of group_2164 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2164 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2164

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2164.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 waaA 7

Product

# Product Occurence
1 lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1519 7 M Cell wall/membrane/envelope biogenesis (M) 3-deoxy-D-manno-octulosonic-acid transferase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02527 7 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] Lipopolysaccharide biosynthesis
Metabolic pathways
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
KDO2-lipid A biosynthesis, Raetz pathway, non-LpxL-LpxM type

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00534 7 Glycosyl transferases group 1
PF04413 7 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)

Annotations of the 19 SwissProt hits

Annotation Number of occurrences
3-deoxy-D-manno-octulosonic acid transferase 17
Bifunctional glycosyltransferase/methyltransferase 1
Probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial 1

Protein length

Unique protein length 425

Protein length distribution