Homologs in group_2127

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15985 FBDBKF_15985 100.0 Morganella morganii S1 mscK mechanosensitive channel MscK
EHELCC_18590 EHELCC_18590 100.0 Morganella morganii S2 mscK mechanosensitive channel MscK
NLDBIP_17420 NLDBIP_17420 100.0 Morganella morganii S4 mscK mechanosensitive channel MscK
HKOGLL_17155 HKOGLL_17155 100.0 Morganella morganii S5 mscK mechanosensitive channel MscK
F4V73_RS16325 F4V73_RS16325 90.5 Morganella psychrotolerans mscK mechanosensitive channel MscK
PMI_RS00655 PMI_RS00655 56.7 Proteus mirabilis HI4320 mscK mechanosensitive channel MscK

Distribution of the homologs in the orthogroup group_2127

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2127

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77338 0.0 1064 48 9 1129 1 mscK Mechanosensitive channel MscK Escherichia coli (strain K12)
Q57362 0.0 635 35 20 1140 1 HI_0195.1 Uncharacterized MscS family protein HI_0195.1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P39285 1.96e-96 335 27 27 1139 1 mscM Miniconductance mechanosensitive channel MscM Escherichia coli (strain K12)
O52401 5.07e-22 100 28 4 255 3 mscS Small-conductance mechanosensitive channel Edwardsiella ictaluri (strain 93-146)
Q55717 2.71e-19 93 28 3 218 3 slr0639 Uncharacterized MscS family protein slr0639 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q8K9B1 3.18e-19 92 27 4 222 3 BUsg_437 Uncharacterized MscS family protein BUsg_437 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P0C0S3 1.38e-18 90 26 5 252 3 mscS Small-conductance mechanosensitive channel Shigella flexneri
P0C0S1 1.38e-18 90 26 5 252 1 mscS Small-conductance mechanosensitive channel Escherichia coli (strain K12)
P0C0S2 1.38e-18 90 26 5 252 3 mscS Small-conductance mechanosensitive channel Escherichia coli O157:H7
O66994 2.82e-18 91 24 6 302 3 aq_812 Uncharacterized MscS family protein aq_812 Aquifex aeolicus (strain VF5)
Q89AB5 6.63e-17 85 27 4 221 3 bbp_402 Uncharacterized MscS family protein bbp_402 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q57634 4.38e-16 84 23 5 260 1 MJ0170 Small-conductance mechanosensitive channel MscMJ Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P57527 1.16e-15 82 26 2 214 3 BU452 Uncharacterized MscS family protein BU452 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
O28726 7.57e-15 79 26 4 233 3 AF_1546 Uncharacterized MscS family protein AF_1546 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q58543 2.66e-13 76 28 4 176 1 MJ1143 Large-conductance mechanosensitive channel MscMJLR Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P0DKS1 4.55e-10 65 24 3 210 3 mscS Small-conductance mechanosensitive channel Wigglesworthia glossinidia brevipalpis
O25170 2.18e-09 65 25 4 196 3 HP_0415 Uncharacterized MscS family protein HP_0415 Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZKG7 2.89e-09 65 23 5 199 3 jhp_0969 Uncharacterized MscS family protein jhp_0969 Helicobacter pylori (strain J99 / ATCC 700824)
P0AEB5 8.48e-09 62 31 5 157 1 ynaI Low conductance mechanosensitive channel YnaI Escherichia coli (strain K12)
P0AEB6 8.48e-09 62 31 5 157 3 ynaI Low conductance mechanosensitive channel YnaI Escherichia coli O157:H7
T0DVE4 3.17e-08 59 24 3 206 1 mscS Small-conductance mechanosensitive channel Helicobacter pylori (strain UM084)
O07594 4.61e-08 60 24 5 198 3 yhdY Uncharacterized MscS family protein YhdY Bacillus subtilis (strain 168)
Q8R6L9 2.17e-06 54 28 3 152 1 mscS Small-conductance mechanosensitive channel Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
O34897 8.42e-06 52 37 1 72 2 ykuT Uncharacterized MscS family protein YkuT Bacillus subtilis (strain 168)
Q8VZL4 1.31e-05 52 25 0 103 1 MSL1 Mechanosensitive ion channel protein 1, mitochondrial Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_17240
Feature type CDS
Gene mscK
Product mechanosensitive channel MscK
Location 16196 - 19606 (strand: -1)
Length 3411 (nucleotides) / 1136 (amino acids)

Contig

Accession ZDB_378
Length 56187 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2127
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00924 Mechanosensitive ion channel, beta-domain
PF12794 Mechanosensitive ion channel inner membrane domain 1
PF12795 Mechanosensitive ion channel porin domain
PF21082 Mechanosensitive ion channel MscS, C-terminal
PF21088 Mechanosensitive ion channel, transmembrane helices 2/3

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3264 Cell wall/membrane/envelope biogenesis (M) M Small-conductance mechanosensitive channel MscK

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05802 potassium-dependent mechanosensitive channel - -

Protein Sequence

MKRISRVPASGLLRRIFLRLFTCFIFLLPVLAQNSAVAAVQDIPDRNTIQTELNALNNRKEQTAADKLSVQDLERALVFYDNLDALKEKSQALKKRVDEAPKLSDQVTQKLTQIKSLTDEGLAEYRASIENLPLSQLELKLNSTLEALQTAQNNLSSYNSDLIALQTQPERAQNIMYGNVQRLQQIRVLLNDSMAAQKVLRPTEIEALQVEQYYLQQQIDYQKRALQSNTQLQNLLQVQRDYVVERIKQLESNIDVIQETVSGKRLDYSEEAAKEAQSSDDTQRNMQDDPLVQREIALNHDLSEKLVAATRDNNQLVQRTIKVRSILDRALQSERNLKEQITVLRGSLLLSRILFKEQIYLPPDLLIKDLPDRIADMRLAQFEINQQRDKLYQPDNFVSTMIDEYAKTHDMPATAAELRAQKHALMQVVSVRQDLLDQLNTQMGNQISQAINLQLDQTQLVTVVASLEKTLAQQIFWVNSNKPVNLAWFQSFPGAAKQELTSLDLNWSLQSLINGFVDSLFITIPLLIIALLLRFGTKNIDTKLAEINADVGRLKKDRQIYTPMALGLMLIKTLPSSLFVIAFGYFCLKTGSADSALMWTISRQLALFWVLFEWSYRIMKPEGIAVTHFGIDPEVCRTGRRRLVRLALPLLPIMLWAAYGMEYPLRLVDDVIGQLVVPVALVFVFAFTLPFCIEIWREKGSHLVRAFLLTLLTFSPLVLVVLVGLGYYYTALRLSSRWIDSLYLLLLWYIVYHTSLRGLALAARRLTYQRALARRQKQQVQHKEQHEGDDVPDVIVEEPPMSMELINQQSLRLTSMVLFIVFAAAFYGIWSDFITIFSFFDSITLWHYNVDTALGNVVEAITLGDLILSVLIVVVSWIMMRNLPGLLEVLVLSRLSLRQGTSYAITTILTYMIVGIGTIAAFGTLGVSWGKLQWLAAALTFGLSFGLQEIFANFVSGIIILFERPIRIGDTVTIGTFSGTVNKIRIRATTVIDFDRKEVIIPNKAFMTERLTNWSLSDTVTRIVINVGVAYGSDLAKVKEVLLKAATDNPKVMTDPAPGVYFTEFGASSLDHQLRFYVRTIGDRSATTDEVNRAIDRMARENDINIAFNQLEVYLHDQNSGKEVQVQGKDDGAQPA

Flanking regions ( +/- flanking 50bp)

ATAACCTGAAACAGACAGCCGGGGAAGGGCAGATACAGGTGGATATTATTATGAAGCGAATCAGCCGTGTCCCGGCTTCCGGTCTGCTGAGGCGGATTTTCCTCCGTCTTTTTACCTGTTTCATATTTCTGCTGCCGGTACTGGCGCAGAACAGCGCGGTGGCGGCCGTACAGGATATTCCTGACCGCAACACCATTCAGACCGAACTCAATGCCCTGAATAACCGCAAAGAACAGACTGCCGCTGATAAGCTGTCAGTGCAGGATCTGGAGCGGGCGCTGGTGTTTTATGACAATCTCGATGCCCTGAAAGAAAAATCACAGGCACTGAAAAAGCGGGTGGATGAAGCCCCGAAACTGTCAGATCAGGTCACACAAAAATTAACGCAGATAAAATCATTAACTGATGAAGGACTGGCGGAATACCGGGCCTCCATTGAAAATCTGCCGCTCTCGCAACTGGAGCTGAAACTTAACAGCACCCTTGAGGCGTTGCAGACCGCACAGAATAACCTCTCTTCTTATAATAGTGATCTGATTGCTCTCCAGACTCAGCCTGAGCGCGCACAGAATATTATGTACGGTAATGTGCAGCGTCTGCAGCAGATCCGCGTCCTGCTGAATGATTCGATGGCGGCCCAGAAAGTGCTGCGGCCGACGGAAATTGAAGCCCTTCAGGTGGAGCAGTATTACTTACAGCAGCAGATTGATTATCAGAAACGGGCATTACAGTCGAACACCCAGTTACAGAATCTGCTGCAGGTGCAGCGTGACTATGTGGTGGAGCGCATCAAACAGCTGGAAAGTAATATTGATGTAATTCAGGAAACGGTCAGCGGCAAGCGGCTGGATTATTCGGAAGAGGCGGCCAAAGAGGCGCAGAGTTCGGATGATACCCAGCGCAATATGCAGGATGATCCGCTGGTGCAGCGTGAAATCGCGCTCAACCATGATTTAAGTGAAAAGCTGGTCGCCGCCACCCGCGATAATAACCAGCTGGTGCAGCGCACCATTAAGGTACGCAGTATTCTGGATCGCGCACTGCAATCCGAGCGCAACCTCAAAGAGCAGATTACCGTGCTGCGCGGCAGCCTGCTGCTCTCCCGTATCCTGTTTAAAGAGCAGATCTACCTGCCGCCGGATTTGCTGATTAAAGATTTGCCGGACCGGATTGCGGACATGCGTCTGGCGCAGTTTGAAATCAACCAGCAGCGCGACAAGCTTTATCAGCCGGACAACTTTGTCAGCACCATGATTGACGAGTACGCCAAAACCCATGATATGCCGGCGACCGCAGCAGAGCTGCGGGCTCAGAAACATGCGCTGATGCAGGTGGTGTCTGTCCGTCAGGATTTATTGGATCAGCTGAATACCCAGATGGGTAACCAGATTTCCCAGGCGATTAACCTGCAGCTGGATCAGACTCAACTGGTCACCGTGGTGGCCTCACTGGAGAAAACCCTCGCGCAGCAGATTTTCTGGGTCAACAGTAACAAACCGGTCAACCTGGCCTGGTTCCAGTCCTTCCCGGGCGCGGCCAAACAGGAACTGACGTCACTGGATCTGAACTGGTCGCTGCAAAGCCTGATCAACGGTTTTGTCGATTCCCTCTTTATTACCATTCCGCTGCTGATTATTGCGCTGCTGCTGCGTTTCGGTACCAAGAACATTGATACCAAACTGGCTGAAATTAATGCCGATGTCGGGCGGCTGAAAAAAGATCGCCAGATCTACACACCGATGGCGCTGGGGCTGATGCTGATCAAAACCCTGCCGTCCTCACTGTTTGTGATTGCCTTCGGCTATTTCTGCCTGAAAACCGGCAGTGCGGATTCCGCACTGATGTGGACTATCTCCCGCCAGCTGGCTCTCTTCTGGGTGCTGTTTGAGTGGAGTTACCGGATTATGAAACCGGAGGGGATTGCTGTCACACACTTCGGGATCGATCCTGAAGTCTGCCGTACCGGCCGCCGCAGACTGGTGCGCCTGGCACTGCCGCTGCTGCCGATTATGCTGTGGGCGGCTTACGGGATGGAATACCCGCTGCGCCTGGTGGATGATGTGATTGGTCAGCTGGTGGTGCCGGTGGCACTGGTGTTTGTCTTTGCATTCACACTGCCGTTCTGCATTGAGATCTGGCGCGAGAAGGGCTCTCACCTGGTGCGGGCGTTCCTGCTGACCTTGCTGACATTCTCCCCGCTGGTACTGGTGGTGCTGGTCGGGCTGGGCTATTACTACACGGCACTGCGCCTGAGCAGCCGCTGGATAGACAGTCTCTATCTGCTGCTGCTGTGGTATATCGTCTATCATACCAGTCTGCGCGGCCTGGCACTGGCGGCACGGCGTCTGACCTATCAGCGTGCGCTGGCCCGCCGTCAGAAACAGCAGGTTCAGCATAAAGAGCAGCATGAGGGGGATGATGTCCCGGATGTGATTGTGGAAGAGCCGCCGATGTCGATGGAGCTGATTAACCAGCAGTCACTGCGTCTGACCTCGATGGTCCTGTTTATTGTCTTTGCAGCGGCGTTCTACGGCATATGGTCTGATTTTATTACCATTTTCTCCTTCTTTGACAGTATCACGCTGTGGCATTACAACGTCGATACCGCGCTGGGGAATGTGGTGGAGGCAATCACGCTCGGGGATCTGATCCTGTCTGTCCTGATTGTGGTGGTGTCCTGGATAATGATGCGCAACCTGCCCGGCCTGCTTGAGGTCCTTGTGCTCTCGCGGCTCTCGCTGCGCCAGGGCACCTCATATGCTATCACCACCATTCTGACTTATATGATTGTCGGGATCGGGACGATTGCCGCGTTCGGCACCCTCGGGGTGTCGTGGGGTAAATTACAGTGGCTGGCAGCAGCCTTAACCTTCGGTCTCAGCTTCGGGTTACAGGAAATCTTTGCTAACTTTGTTTCGGGTATCATTATTCTGTTCGAACGCCCGATCCGTATCGGCGATACCGTCACTATCGGTACTTTCTCCGGTACGGTTAACAAGATCCGCATCCGTGCGACCACGGTGATTGATTTTGACCGCAAAGAAGTCATTATCCCGAACAAAGCCTTTATGACCGAGCGCCTGACCAACTGGTCACTCTCTGATACGGTAACGCGGATTGTGATTAATGTCGGTGTGGCTTACGGCTCGGATCTGGCGAAAGTGAAAGAGGTCTTGCTGAAAGCGGCCACCGATAACCCGAAAGTGATGACCGACCCGGCACCGGGTGTGTATTTCACCGAGTTTGGCGCCAGCAGCCTCGATCATCAGCTGCGTTTCTATGTGCGCACCATCGGCGACCGCAGTGCCACCACGGATGAAGTGAACCGCGCGATTGACCGGATGGCGCGTGAAAACGATATCAATATCGCCTTCAATCAGCTGGAAGTGTATCTCCACGATCAGAACAGCGGCAAAGAAGTGCAGGTGCAGGGAAAGGATGACGGCGCTCAGCCGGCCTGATCGTTCTCTGTATCGCGCAGTTTGTTTTCATAATCGCGGCGGACAATCTG