Homologs in group_2164

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15985 FBDBKF_15985 56.7 Morganella morganii S1 mscK mechanosensitive channel MscK
EHELCC_18590 EHELCC_18590 56.7 Morganella morganii S2 mscK mechanosensitive channel MscK
NLDBIP_17420 NLDBIP_17420 56.7 Morganella morganii S4 mscK mechanosensitive channel MscK
LHKJJB_17240 LHKJJB_17240 56.7 Morganella morganii S3 mscK mechanosensitive channel MscK
HKOGLL_17155 HKOGLL_17155 56.7 Morganella morganii S5 mscK mechanosensitive channel MscK
F4V73_RS16325 F4V73_RS16325 56.4 Morganella psychrotolerans mscK mechanosensitive channel MscK

Distribution of the homologs in the orthogroup group_2164

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2164

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77338 0.0 1041 48 15 1143 1 mscK Mechanosensitive channel MscK Escherichia coli (strain K12)
Q57362 0.0 609 35 23 1131 1 HI_0195.1 Uncharacterized MscS family protein HI_0195.1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P39285 2.07e-100 346 27 26 1136 1 mscM Miniconductance mechanosensitive channel MscM Escherichia coli (strain K12)
O52401 6.43e-25 109 29 6 267 3 mscS Small-conductance mechanosensitive channel Edwardsiella ictaluri (strain 93-146)
Q89AB5 1.17e-23 105 31 2 214 3 bbp_402 Uncharacterized MscS family protein bbp_402 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q55717 4.9e-23 104 27 3 258 3 slr0639 Uncharacterized MscS family protein slr0639 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q8K9B1 1.33e-22 102 28 3 222 3 BUsg_437 Uncharacterized MscS family protein BUsg_437 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57527 4.22e-22 101 30 2 215 3 BU452 Uncharacterized MscS family protein BU452 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P0C0S3 1.14e-21 100 27 3 249 3 mscS Small-conductance mechanosensitive channel Shigella flexneri
P0C0S1 1.14e-21 100 27 3 249 1 mscS Small-conductance mechanosensitive channel Escherichia coli (strain K12)
P0C0S2 1.14e-21 100 27 3 249 3 mscS Small-conductance mechanosensitive channel Escherichia coli O157:H7
Q57634 4.69e-17 87 24 5 254 1 MJ0170 Small-conductance mechanosensitive channel MscMJ Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O66994 5.08e-17 87 29 6 209 3 aq_812 Uncharacterized MscS family protein aq_812 Aquifex aeolicus (strain VF5)
O28726 7.11e-17 85 29 2 211 3 AF_1546 Uncharacterized MscS family protein AF_1546 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q58543 1.82e-12 73 30 7 183 1 MJ1143 Large-conductance mechanosensitive channel MscMJLR Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P0DKS1 2.86e-12 72 26 3 210 3 mscS Small-conductance mechanosensitive channel Wigglesworthia glossinidia brevipalpis
Q9ZKG7 2.83e-10 68 25 5 193 3 jhp_0969 Uncharacterized MscS family protein jhp_0969 Helicobacter pylori (strain J99 / ATCC 700824)
O25170 3.05e-10 68 25 4 192 3 HP_0415 Uncharacterized MscS family protein HP_0415 Helicobacter pylori (strain ATCC 700392 / 26695)
O34897 1.35e-08 60 28 4 149 2 ykuT Uncharacterized MscS family protein YkuT Bacillus subtilis (strain 168)
P0AEB5 3.03e-08 60 27 6 217 1 ynaI Low conductance mechanosensitive channel YnaI Escherichia coli (strain K12)
P0AEB6 3.03e-08 60 27 6 217 3 ynaI Low conductance mechanosensitive channel YnaI Escherichia coli O157:H7
O07594 4.89e-08 60 24 9 238 3 yhdY Uncharacterized MscS family protein YhdY Bacillus subtilis (strain 168)
Q8VZL4 1.38e-07 59 28 0 101 1 MSL1 Mechanosensitive ion channel protein 1, mitochondrial Arabidopsis thaliana
Q8R6L9 3.07e-07 57 23 6 235 1 mscS Small-conductance mechanosensitive channel Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
T0DVE4 1.44e-06 54 23 3 206 1 mscS Small-conductance mechanosensitive channel Helicobacter pylori (strain UM084)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00655
Feature type CDS
Gene mscK
Product mechanosensitive channel MscK
Location 167517 - 170945 (strand: 1)
Length 3429 (nucleotides) / 1142 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2164
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00924 Mechanosensitive ion channel, beta-domain
PF12794 Mechanosensitive ion channel inner membrane domain 1
PF12795 Mechanosensitive ion channel porin domain
PF21082 Mechanosensitive ion channel MscS, C-terminal
PF21088 Mechanosensitive ion channel, transmembrane helices 2/3

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3264 Cell wall/membrane/envelope biogenesis (M) M Small-conductance mechanosensitive channel MscK

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05802 potassium-dependent mechanosensitive channel - -

Protein Sequence

MRGSNVFIRLNHFISTIFIVSILFVLLGNILFTPAKAETVSNNLPTKESIQNQLNLLNKRSDLSAEDKLTIGDLEQALLLLDNIQQLEKKADDYNKTVEQLPEKLRSIQNQLSQLKQKIANKEVDDYRQSLESLPLATLESQLEEVLQSLAKAQEDLANYSNELIVLQTQPERAQSVLFNNSERLQQIRIALNKSSADKAQMRSSSVQLLQLEQYYLQQQNSFQKRTLQSNVQLQSLLQLQRDYSSAYIDLSQEHAQLLQEILSDKRLDSSEEVAKEAQTAELSNQAIKNNAFYLAQADINKKLSDKLIITTQNNNELNRHSLMVKNRLDRAIQSERNLKEQIDVLKGSLLLSRILFEEQIELPDDIFINKLPDKIADLRLEQFEINKQRDQIFQPNLYIDQLMQEYQAAHPEITDKNELKELHNALLQLIDARRDLLDKLNNQLGSQISESINLQMDQQQLRSVVSSLENTLAQQIFWVSSNKPINLSWFSTFPDQAVAEFQSFKLNWSNENLLTGAKKSYPVLIALVLFSSILIWQRKKFDKQFDKLSADINKLNKDTQLHTPLALGIVFLKTLPLSCIVLAIGYWLINSFNVQQEFIWSFTWQFAVFWLMFEWSYRLMSDNGVAVNHFKIPLERVQQNRKRLLRLSLPMLPIILLSAYGINNPLLLVGDVIGQLVTIISLFFISLCALPFCREMWQEKGNHVVRTVVITLLTFSPLLLMGLVIFGYYYTALRLANRWIDSLYLLMLWFIAYHASLRGLTVAARRLAYRRALERRQAMLKEKKEGDDNTLEPIQEPPMDMEQINQQSLRLTTMILFIIFASSFYGIWSDFITIFTYLDGITLWHYNLPTELGNVVKAVTVADLLLSFAIMAISWFMIRNLPGLLEVLILSRIKLQQGASYAITTILTYIIIAIGTIVSLGILGVAWEKLQWLAAALTVGLGFGLQEIFANFVSGIIILFERPVRIGDTVTIGSYSGTVSRIRIRATTVTDFDRKEVIIPNKAFVTERLINWTLSDTVTRIIIQVGVAYGSDLDKVKTILMKAAKDNPKVMTEPEPVVLFTEFGASTLNHELRFYVRTLGDRNTAIDEVNRAIDKLCNENDINIAFNQLEVYLHNKQGEEVQEIKKGPLDGSTPEANTPFN

Flanking regions ( +/- flanking 50bp)

GATTATACTAAGAGGCAGTTTTTCAATATTCATTGAACAAGTTGCTCAATATGCGTGGATCTAACGTTTTTATTCGATTAAATCATTTTATTTCGACAATATTTATTGTCTCTATCCTCTTTGTTTTGTTAGGAAATATACTTTTTACCCCGGCTAAAGCAGAAACAGTCAGCAATAATTTACCCACCAAAGAAAGTATTCAAAACCAGCTTAATTTATTAAATAAACGTAGTGACTTAAGTGCCGAAGATAAACTCACTATTGGTGATCTAGAGCAGGCATTGCTACTTCTTGATAATATTCAACAACTAGAGAAAAAAGCAGACGACTATAATAAGACAGTAGAGCAATTACCAGAAAAGCTACGCAGTATTCAAAATCAATTAAGTCAATTAAAACAGAAAATAGCAAACAAAGAAGTTGATGACTACCGTCAATCTTTAGAGAGTCTACCGCTTGCAACTTTAGAGTCGCAATTAGAAGAGGTTTTACAATCCTTAGCGAAAGCACAGGAAGATTTAGCCAATTACAGTAATGAGCTTATTGTTTTACAAACGCAACCAGAAAGGGCGCAATCTGTTTTATTTAATAACTCAGAAAGATTGCAACAAATACGAATTGCATTAAATAAAAGCAGTGCAGATAAAGCTCAAATGCGATCTTCTTCTGTGCAACTTTTACAATTAGAACAATATTATTTGCAACAACAAAACAGTTTTCAAAAACGAACACTGCAATCTAATGTACAGCTACAAAGCTTATTACAATTACAGCGTGATTATAGTTCAGCCTATATTGACCTCTCTCAAGAGCATGCTCAACTACTGCAAGAGATCTTAAGTGATAAACGTTTAGACAGTTCAGAAGAGGTTGCCAAAGAGGCGCAGACGGCAGAGCTGAGTAATCAGGCGATTAAAAATAACGCTTTTTATTTAGCTCAAGCTGATATTAATAAAAAACTCAGCGATAAGCTGATTATTACTACACAAAATAATAATGAGTTAAATCGCCATAGTTTAATGGTCAAAAACCGCCTAGATAGAGCTATCCAATCAGAGCGCAATCTTAAAGAGCAAATTGATGTATTGAAAGGGAGTCTGTTGCTCTCTCGTATTCTATTTGAAGAGCAAATTGAGCTACCTGATGATATCTTTATCAATAAGTTACCGGATAAAATTGCTGACTTACGTTTAGAACAGTTTGAAATCAATAAACAAAGAGATCAGATTTTTCAGCCGAATCTCTATATCGACCAATTAATGCAAGAGTACCAAGCCGCACATCCGGAAATTACTGATAAAAATGAGCTAAAAGAGCTACATAATGCATTATTACAACTGATTGATGCGCGACGAGATCTACTGGATAAGCTCAATAATCAACTGGGTAGCCAAATTTCTGAATCTATTAATTTACAGATGGATCAGCAACAGCTACGTAGTGTGGTGAGTTCATTAGAAAACACCTTAGCGCAACAAATATTCTGGGTAAGCAGTAATAAACCGATTAACCTCAGTTGGTTCTCAACCTTTCCAGATCAGGCAGTGGCTGAATTTCAAAGTTTTAAACTCAACTGGTCAAATGAAAATCTGTTGACCGGGGCTAAAAAATCATATCCTGTGCTGATTGCGCTAGTTTTGTTCAGTAGCATACTGATTTGGCAACGTAAAAAATTTGATAAGCAGTTTGATAAATTAAGTGCTGATATTAATAAGCTTAATAAAGATACGCAGTTACATACTCCATTGGCTTTAGGGATTGTTTTCTTAAAAACATTACCCCTTTCTTGTATTGTGTTAGCGATAGGATATTGGCTAATTAATAGCTTTAATGTGCAACAAGAGTTTATCTGGTCTTTTACTTGGCAGTTTGCGGTATTTTGGCTGATGTTTGAGTGGTCTTATCGTTTAATGTCGGATAATGGAGTGGCCGTTAATCACTTTAAGATCCCCCTAGAGCGAGTACAACAAAATCGTAAACGTTTATTACGTTTATCGCTTCCCATGTTGCCCATTATTTTACTTTCCGCTTATGGTATTAATAACCCATTATTGTTAGTGGGTGATGTGATTGGTCAATTAGTGACAATTATTTCACTCTTTTTTATTAGTCTGTGTGCATTACCTTTTTGTCGTGAAATGTGGCAAGAAAAGGGTAATCATGTTGTGAGAACGGTGGTTATCACCTTATTAACTTTCTCGCCTTTACTTTTAATGGGGTTAGTTATTTTTGGTTATTATTACACTGCACTACGTTTAGCCAATCGTTGGATTGATAGTTTATATCTACTTATGTTGTGGTTTATTGCTTACCACGCGAGTTTACGCGGCCTTACTGTTGCTGCAAGACGACTGGCGTATCGTCGAGCGCTAGAGCGCCGACAAGCGATGCTTAAAGAGAAAAAAGAGGGGGACGATAACACTCTCGAGCCAATCCAAGAGCCACCGATGGATATGGAGCAGATAAACCAACAATCATTAAGATTAACCACAATGATCTTATTTATTATCTTTGCTTCCAGTTTTTATGGTATTTGGTCTGACTTTATTACAATTTTTACTTACTTAGATGGTATTACGCTTTGGCATTATAATTTGCCTACAGAGTTAGGTAATGTGGTTAAAGCAGTGACGGTTGCTGACTTACTCCTCTCTTTTGCCATTATGGCTATCTCTTGGTTTATGATAAGAAACCTACCGGGTTTACTCGAAGTTCTTATTCTTTCAAGAATTAAATTACAGCAAGGCGCTTCTTATGCCATTACGACTATTCTGACCTATATTATTATTGCGATAGGTACAATTGTTTCGCTGGGGATATTAGGCGTAGCATGGGAAAAACTACAATGGTTGGCGGCAGCCTTAACGGTTGGTTTAGGGTTTGGTTTACAAGAAATATTCGCTAACTTTGTTTCAGGGATAATTATCTTATTTGAAAGACCGGTCAGAATTGGTGATACGGTGACAATTGGCTCTTATTCTGGAACAGTGAGTCGTATTCGTATCCGAGCAACCACGGTAACGGACTTTGATCGCAAAGAGGTTATTATCCCGAATAAAGCCTTTGTGACTGAACGACTGATCAACTGGACATTATCTGATACTGTCACACGTATTATCATTCAAGTCGGTGTTGCTTATGGTTCTGATCTGGATAAAGTGAAAACCATTTTAATGAAAGCAGCAAAAGATAATCCCAAAGTGATGACTGAGCCAGAGCCTGTGGTGCTGTTTACCGAATTTGGGGCTAGCACGTTAAATCATGAATTACGTTTTTATGTTAGAACGCTTGGGGATAGAAATACTGCTATCGACGAAGTCAACCGCGCTATTGATAAACTTTGCAATGAAAATGATATCAATATCGCGTTTAACCAATTAGAAGTGTATCTGCATAATAAACAAGGAGAAGAAGTGCAAGAAATAAAAAAAGGCCCTCTTGATGGTTCAACACCTGAAGCGAATACGCCATTTAATTAAATAGTAAGATGTTTAGTTAGCGGTTTGATTATCTCGTTTTTTCTCATAAT