Orthogroup:group_2156


Homologs in group_2156

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16225 FBDBKF_16225 Morganella morganii S1 slmA nucleoid occlusion factor SlmA
EHELCC_16260 EHELCC_16260 Morganella morganii S2 slmA nucleoid occlusion factor SlmA
NLDBIP_17080 NLDBIP_17080 Morganella morganii S4 slmA nucleoid occlusion factor SlmA
LHKJJB_17000 LHKJJB_17000 Morganella morganii S3 slmA nucleoid occlusion factor SlmA
HKOGLL_16840 HKOGLL_16840 Morganella morganii S5 slmA nucleoid occlusion factor SlmA
F4V73_RS17375 F4V73_RS17375 Morganella psychrotolerans slmA nucleoid occlusion factor SlmA
PMI_RS15590 PMI_RS15590 Proteus mirabilis HI4320 slmA nucleoid occlusion factor SlmA

Distribution of group_2156 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2156 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2156

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2156.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 slmA 7

Product

# Product Occurence
1 nucleoid occlusion factor SlmA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1309 7 K Transcription (K) DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05501 7 TetR/AcrR family transcriptional regulator - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00440 7 Bacterial regulatory proteins, tetR family
PF22276 7 Tetracyclin repressor-like, C-terminal domain

Annotations of the 109 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional repressor KstR2 3
Nucleoid occlusion factor SlmA 106

Protein length

Min length 197
Max length 201
Mean length (sd) 197.6 (1.5)
Median length 197.0

Protein length distribution