Orthogroup:group_2142


Homologs in group_2142

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16095 FBDBKF_16095 Morganella morganii S1 - DUF560 domain-containing protein
EHELCC_16130 EHELCC_16130 Morganella morganii S2 - DUF560 domain-containing protein
NLDBIP_17210 NLDBIP_17210 Morganella morganii S4 - DUF560 domain-containing protein
LHKJJB_17130 LHKJJB_17130 Morganella morganii S3 - DUF560 domain-containing protein
HKOGLL_16710 HKOGLL_16710 Morganella morganii S5 - DUF560 domain-containing protein
F4V73_RS17520 F4V73_RS17520 Morganella psychrotolerans - surface lipoprotein assembly modifier
PMI_RS15440 PMI_RS15440 Proteus mirabilis HI4320 - surface lipoprotein assembly modifier

Distribution of group_2142 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2142 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2142

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2142.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 DUF560 domain-containing protein 5
2 surface lipoprotein assembly modifier 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2956 7 M Cell wall/membrane/envelope biogenesis (M) Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07280 7 outer membrane protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04575 7 Surface lipoprotein assembly modifier

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Hemophilin secretion modulator 1
Surface lipoprotein assembly modifier 1
Surface lipoprotein assembly modifier 1 1

Protein length

Min length 371
Max length 450
Mean length (sd) 438.7 (29.9)
Median length 450.0

Protein length distribution