Orthogroup:group_2084


Homologs in group_2084

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15590 FBDBKF_15590 Morganella morganii S1 rpmH 50S ribosomal protein L34
EHELCC_15950 EHELCC_15950 Morganella morganii S2 rpmH 50S ribosomal protein L34
NLDBIP_16420 NLDBIP_16420 Morganella morganii S4 rpmH 50S ribosomal protein L34
LHKJJB_16385 LHKJJB_16385 Morganella morganii S3 rpmH 50S ribosomal protein L34
HKOGLL_16155 HKOGLL_16155 Morganella morganii S5 rpmH 50S ribosomal protein L34
F4V73_RS17570 F4V73_RS17570 Morganella psychrotolerans rpmH 50S ribosomal protein L34
PMI_RS15495 PMI_RS15495 Proteus mirabilis HI4320 rpmH 50S ribosomal protein L34

Distribution of group_2084 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2084 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2084

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2084.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpmH 7

Product

# Product Occurence
1 50S ribosomal protein L34 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0230 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L34

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02914 7 large subunit ribosomal protein L34 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00468 7 Ribosomal protein L34

Annotations of the 521 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein bL34 521

Protein length

Min length 46
Max length 47
Mean length (sd) 46.1 (0.4)
Median length 46.0

Protein length distribution