Orthogroup:group_2079


Homologs in group_2079

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15550 FBDBKF_15550 Morganella morganii S1 potE Serine transporter YbeC, amino acid:H+ symporter family
EHELCC_15910 EHELCC_15910 Morganella morganii S2 potE Serine transporter YbeC, amino acid:H+ symporter family
NLDBIP_16460 NLDBIP_16460 Morganella morganii S4 potE Serine transporter YbeC, amino acid:H+ symporter family
LHKJJB_16345 LHKJJB_16345 Morganella morganii S3 potE Serine transporter YbeC, amino acid:H+ symporter family
HKOGLL_16115 HKOGLL_16115 Morganella morganii S5 potE Serine transporter YbeC, amino acid:H+ symporter family
F4V73_RS17600 F4V73_RS17600 Morganella psychrotolerans - amino acid permease
PMI_RS06800 PMI_RS06800 Proteus mirabilis HI4320 gadC glutamate:gamma-aminobutyrate antiporter

Distribution of group_2079 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2079 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2079

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2079.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 potE 5
2 - 1
3 gadC 1

Product

# Product Occurence
1 Serine transporter YbeC, amino acid:H+ symporter family 5
2 amino acid permease 1
3 glutamate:gamma-aminobutyrate antiporter 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0531 7 E Amino acid transport and metabolism (E) Serine transporter YbeC, amino acid:H+ symporter family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K20265 7 glutamate:GABA antiporter Quorum sensing -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13520 7 Amino acid permease

Annotations of the 84 SwissProt hits

Annotation Number of occurrences
Arginine permease CAN1 1
Arginine/agmatine antiporter 7
Arginine/ornithine antiporter 1
Aromatic amino acid transport protein AroP 7
Aspartate/glutamate permease AcaP 1
Branched-chain amino acid permease BcaP 2
Cadaverine/lysine antiporter 3
Cationic amino acid transporter 1 1
Cationic amino acid transporter 2, vacuolar 1
Cationic amino acid transporter 3, mitochondrial 1
Cationic amino acid transporter 4, vacuolar 1
Cationic amino acid transporter 6, chloroplastic 1
Cationic amino acid transporter 7, chloroplastic 1
Cationic amino acid transporter 8, vacuolar 1
Cystine/glutamate transporter 3
D-serine/D-alanine/glycine transporter 3
Dicarboxylic amino acid permease 1
General amino acid permease AGP3 1
Glutamate/gamma-aminobutyrate antiporter 6
Histidine permease 1
Inner membrane transporter YcaM 1
Inner membrane transporter YgjI 1
Inner membrane transporter YjeM 3
Large neutral amino acids transporter small subunit 1 2
Large neutral amino acids transporter small subunit 2 1
Phenylalanine-specific permease 1
Polyamine transporter PUT1 2
Polyamine transporter RMV1 1
Probable agmatine/putrescine antiporter AguD 1
Probable polyamine transporter At1g31820 1
Probable polyamine transporter At1g31830 1
Probable polyamine transporter At3g13620 1
Probable polyamine transporter At3g19553 1
Putative arginine/ornithine antiporter 3
Putrescine transporter PotE 3
Serine permease SerP1 1
Solute carrier family 7 member 12 1
Solute carrier family 7 member 13 1
Uncharacterized amino acid permease YvbW 1
Uncharacterized amino-acid permease C965.11c 1
Uncharacterized protein MJ0609 1
Uncharacterized transporter lpg1691 1
Valine/tyrosine/tryptophan amino-acid permease 1 1
Y+L amino acid transporter 1 3
Y+L amino acid transporter 2 6

Protein length

Min length 493
Max length 517
Mean length (sd) 496.4 (9.1)
Median length 493.0

Protein length distribution