Orthogroup:group_2073


Homologs in group_2073

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15500 FBDBKF_15500 Morganella morganii S1 atpC F0F1 ATP synthase subunit epsilon
EHELCC_15860 EHELCC_15860 Morganella morganii S2 atpC F0F1 ATP synthase subunit epsilon
NLDBIP_16510 NLDBIP_16510 Morganella morganii S4 atpC F0F1 ATP synthase subunit epsilon
LHKJJB_16295 LHKJJB_16295 Morganella morganii S3 atpC F0F1 ATP synthase subunit epsilon
HKOGLL_16065 HKOGLL_16065 Morganella morganii S5 atpC F0F1 ATP synthase subunit epsilon
F4V73_RS17645 F4V73_RS17645 Morganella psychrotolerans - F0F1 ATP synthase subunit epsilon
PMI_RS15180 PMI_RS15180 Proteus mirabilis HI4320 - F0F1 ATP synthase subunit epsilon

Distribution of group_2073 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2073 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2073

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2073.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 atpC 5
2 - 2

Product

# Product Occurence
1 F0F1 ATP synthase subunit epsilon 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0355 7 C Energy production and conversion (C) FoF1-type ATP synthase, epsilon subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02114 7 F-type H+-transporting ATPase subunit epsilon Oxidative phosphorylation
Photosynthesis
Metabolic pathways		 F-type ATPase, prokaryotes and chloroplasts

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00401 7 ATP synthase, Delta/Epsilon chain, long alpha-helix domain
PF02823 7 ATP synthase, Delta/Epsilon chain, beta-sandwich domain

Annotations of the 545 SwissProt hits

Annotation Number of occurrences
ATP synthase epsilon chain 471
ATP synthase epsilon chain 1 7
ATP synthase epsilon chain 2 6
ATP synthase epsilon chain, chloroplastic 58
ATP synthase epsilon chain, plastid 1
ATP synthase epsilon chain, sodium ion specific 2

Protein length

Min length 138
Max length 141
Mean length (sd) 140.6 (1.1)
Median length 141.0

Protein length distribution