COG1546


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1546, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Nicotinamide mononucleotide (NMN) deamidase PncC
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG1546 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2033 FBDBKF_15230 57845 58366 1 pncC nicotinamide-nucleotide amidase Morganella morganii S1
1 group_2033 EHELCC_11015 26540 27061 -1 pncC nicotinamide-nucleotide amidase Morganella morganii S2
2 group_2033 NLDBIP_11360 26540 27061 -1 pncC nicotinamide-nucleotide amidase Morganella morganii S4
3 group_2033 LHKJJB_11220 26540 27061 -1 pncC nicotinamide-nucleotide amidase Morganella morganii S3
4 group_2033 HKOGLL_09830 26540 27061 -1 pncC nicotinamide-nucleotide amidase Morganella morganii S5
5 group_2033 F4V73_RS12215 26014 26535 -1 pncC nicotinamide-nucleotide amidase Morganella psychrotolerans
6 group_2033 PMI_RS01790 424985 425491 1 pncC nicotinamide-nucleotide amidase Proteus mirabilis HI4320