Orthogroup:group_2063


Homologs in group_2063

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15450 FBDBKF_15450 Morganella morganii S1 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
EHELCC_15810 EHELCC_15810 Morganella morganii S2 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
NLDBIP_16560 NLDBIP_16560 Morganella morganii S4 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
LHKJJB_16245 LHKJJB_16245 Morganella morganii S3 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
HKOGLL_16015 HKOGLL_16015 Morganella morganii S5 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
F4V73_RS17695 F4V73_RS17695 Morganella psychrotolerans mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
PMI_RS15130 PMI_RS15130 Proteus mirabilis HI4320 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG

Distribution of group_2063 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2063 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2063

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2063.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mnmG 7

Product

# Product Occurence
1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0445 7 J Translation, ribosomal structure and biogenesis (J) tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03495 7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01134 7 Glucose inhibited division protein A
PF13932 7 tRNA modifying enzyme MnmG/GidA C-terminal helical bundle
PF21680 7 tRNA modifying enzyme MnmG/GidA C-terminal helical domain

Annotations of the 507 SwissProt hits

Annotation Number of occurrences
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 504
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 1 1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 2 2

Protein length

Min length 629
Max length 632
Mean length (sd) 629.4 (1.1)
Median length 629.0

Protein length distribution