Orthogroup:group_2041


Homologs in group_2041

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15305 FBDBKF_15305 Morganella morganii S1 rpsP 30S ribosomal protein S16
EHELCC_10940 EHELCC_10940 Morganella morganii S2 rpsP 30S ribosomal protein S16
NLDBIP_11285 NLDBIP_11285 Morganella morganii S4 rpsP 30S ribosomal protein S16
LHKJJB_11145 LHKJJB_11145 Morganella morganii S3 rpsP 30S ribosomal protein S16
HKOGLL_09755 HKOGLL_09755 Morganella morganii S5 rpsP 30S ribosomal protein S16
F4V73_RS12145 F4V73_RS12145 Morganella psychrotolerans rpsP 30S ribosomal protein S16
PMI_RS01860 PMI_RS01860 Proteus mirabilis HI4320 rpsP 30S ribosomal protein S16

Distribution of group_2041 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2041 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2041

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2041.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpsP 7

Product

# Product Occurence
1 30S ribosomal protein S16 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0228 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein S16

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02959 7 small subunit ribosomal protein S16 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00886 7 Ribosomal protein S16

Annotations of the 530 SwissProt hits

Annotation Number of occurrences
Small ribosomal subunit protein bS16 526
Small ribosomal subunit protein bS16m 4

Protein length

Unique protein length 82

Protein length distribution