Orthogroup:group_2024



Homologs in group_2024

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15185 FBDBKF_15185 Morganella morganii S1 pepD Di- or tripeptidase
EHELCC_11060 EHELCC_11060 Morganella morganii S2 pepD Di- or tripeptidase
NLDBIP_11405 NLDBIP_11405 Morganella morganii S4 pepD Di- or tripeptidase
LHKJJB_11265 LHKJJB_11265 Morganella morganii S3 pepD Di- or tripeptidase
HKOGLL_09875 HKOGLL_09875 Morganella morganii S5 pepD Di- or tripeptidase
F4V73_RS12260 F4V73_RS12260 Morganella psychrotolerans pepD beta-Ala-His dipeptidase
PMI_RS01745 PMI_RS01745 Proteus mirabilis HI4320 - aminoacyl-histidine dipeptidase

Distribution of group_2024 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2024 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2024

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2024.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pepD 6
2 - 1

Product

# Product Occurence
1 Di- or tripeptidase 5
2 beta-Ala-His dipeptidase 1
3 aminoacyl-histidine dipeptidase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2195 7 E Amino acid transport and metabolism (E) Di- or tripeptidase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01270 7 dipeptidase D [EC:3.4.13.-] Glutathione metabolism
Metabolic pathways
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01546 7 Peptidase family M20/M25/M40
PF07687 7 Peptidase dimerisation domain

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Cytosol non-specific dipeptidase 2
Uncharacterized protein YqjE 1

Protein length

Min length 485
Max length 486
Mean length (sd) 485.9 (0.4)
Median length 486.0

Protein length distribution