Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K06899
Protein list: lists the 13 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
KO part of 0 pathways
KO part of 0 modules
Occurence in the database
K06899 is associated with 13 different proteins |
The 13 proteins are classified into 3 different orthogroup(s) |
Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
---|---|---|---|---|---|---|---|---|
0 | group_3284 | FBDBKF_08890 | 159865 | 161013 | 1 | Nucleoid-associated protein | Morganella morganii S1 | |
1 | group_3284 | EHELCC_12635 | 2712 | 3860 | -1 | Nucleoid-associated protein | Morganella morganii S2 | |
2 | group_3284 | NLDBIP_12975 | 2712 | 3860 | -1 | Nucleoid-associated protein | Morganella morganii S4 | |
3 | group_3284 | LHKJJB_13580 | 158583 | 159731 | 1 | Nucleoid-associated protein | Morganella morganii S3 | |
4 | group_3284 | HKOGLL_11450 | 2712 | 3860 | -1 | Nucleoid-associated protein | Morganella morganii S5 | |
5 | group_2024 | FBDBKF_14900 | 80721 | 81725 | -1 | yejK | nucleoid-associated protein YejK | Morganella morganii S1 |
6 | group_2024 | EHELCC_15705 | 110797 | 111801 | -1 | yejK | nucleoid-associated protein YejK | Morganella morganii S2 |
7 | group_2024 | NLDBIP_16235 | 110797 | 111801 | -1 | yejK | nucleoid-associated protein YejK | Morganella morganii S4 |
8 | group_2024 | LHKJJB_15605 | 4885 | 5889 | 1 | yejK | nucleoid-associated protein YejK | Morganella morganii S3 |
9 | group_2024 | HKOGLL_14725 | 4097 | 5101 | 1 | yejK | nucleoid-associated protein YejK | Morganella morganii S5 |
10 | group_2024 | F4V73_RS07700 | 1610276 | 1611280 | -1 | yejK | nucleoid-associated protein YejK | Morganella psychrotolerans |
11 | group_2024 | PMI_RS04050 | 907108 | 908112 | 1 | yejK | nucleoid-associated protein YejK | Proteus mirabilis HI4320 |
12 | group_4109 | PMI_RS17310 | 3801982 | 3803076 | 1 | nucleoid-associated protein | Proteus mirabilis HI4320 |