Orthogroup:group_1999


Homologs in group_1999

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15040 FBDBKF_15040 Morganella morganii S1 yggS Pyridoxal 5'-phosphate homeostasis protein YggS, UPF0001 family
EHELCC_11205 EHELCC_11205 Morganella morganii S2 yggS Pyridoxal 5'-phosphate homeostasis protein YggS, UPF0001 family
NLDBIP_11550 NLDBIP_11550 Morganella morganii S4 yggS Pyridoxal 5'-phosphate homeostasis protein YggS, UPF0001 family
LHKJJB_11410 LHKJJB_11410 Morganella morganii S3 yggS Pyridoxal 5'-phosphate homeostasis protein YggS, UPF0001 family
HKOGLL_10020 HKOGLL_10020 Morganella morganii S5 yggS Pyridoxal 5'-phosphate homeostasis protein YggS, UPF0001 family
F4V73_RS12410 F4V73_RS12410 Morganella psychrotolerans - YggS family pyridoxal phosphate-dependent enzyme
PMI_RS01605 PMI_RS01605 Proteus mirabilis HI4320 - YggS family pyridoxal phosphate-dependent enzyme

Distribution of group_1999 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1999 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1999

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1999.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yggS 5
2 - 2

Product

# Product Occurence
1 Pyridoxal 5'-phosphate homeostasis protein YggS, UPF0001 family 5
2 YggS family pyridoxal phosphate-dependent enzyme 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0325 7 H Coenzyme transport and metabolism (H) Pyridoxal 5'-phosphate homeostasis protein YggS, UPF0001 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06997 7 PLP dependent protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01168 7 Alanine racemase, N-terminal domain

Annotations of the 30 SwissProt hits

Annotation Number of occurrences
Pyridoxal phosphate homeostasis protein 30

Protein length

Unique protein length 232

Protein length distribution