Orthogroup:group_1989


Homologs in group_1989

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14985 FBDBKF_14985 Morganella morganii S1 mltC membrane-bound lytic murein transglycosylase MltC
EHELCC_11260 EHELCC_11260 Morganella morganii S2 mltC membrane-bound lytic murein transglycosylase MltC
NLDBIP_11605 NLDBIP_11605 Morganella morganii S4 mltC membrane-bound lytic murein transglycosylase MltC
LHKJJB_11465 LHKJJB_11465 Morganella morganii S3 mltC membrane-bound lytic murein transglycosylase MltC
HKOGLL_10075 HKOGLL_10075 Morganella morganii S5 mltC membrane-bound lytic murein transglycosylase MltC
F4V73_RS12465 F4V73_RS12465 Morganella psychrotolerans mltC membrane-bound lytic murein transglycosylase MltC
PMI_RS01545 PMI_RS01545 Proteus mirabilis HI4320 mltC membrane-bound lytic murein transglycosylase MltC

Distribution of group_1989 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1989 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1989

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1989.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mltC 7

Product

# Product Occurence
1 membrane-bound lytic murein transglycosylase MltC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0741 7 M Cell wall/membrane/envelope biogenesis (M) Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K08306 7 peptidoglycan lytic transglycosylase C [EC:4.2.2.29] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01464 7 Transglycosylase SLT domain
PF11873 7 Membrane-bound lytic murein transglycosylase C, N-terminal domain

Annotations of the 134 SwissProt hits

Annotation Number of occurrences
Bifunctional muramidase/lytic transglycosylase CwlQ 1
Endo-type membrane-bound lytic murein transglycosylase A 38
Endo-type membrane-bound lytic murein transglycosylase A-like protein 1
Membrane-bound lytic murein transglycosylase C 67
Membrane-bound lytic murein transglycosylase E 2
Membrane-bound lytic murein transglycosylase F 15
Membrane-bound lytic murein transglycosylase F 1 1
Membrane-bound lytic murein transglycosylase F 2 1
Probable tape measure protein 1
Putative soluble lytic murein transglycosylase 1
Putative tributyltin chloride resistance protein 1
SPbeta prophage-derived uncharacterized transglycosylase YomI 1
Soluble lytic murein transglycosylase 3
Transglycosylase 1

Protein length

Min length 356
Max length 371
Mean length (sd) 367.0 (6.9)
Median length 371.0

Protein length distribution