Orthogroup:group_1982


Homologs in group_1982

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14870 FBDBKF_14870 Morganella morganii S1 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase
EHELCC_15675 EHELCC_15675 Morganella morganii S2 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase
NLDBIP_16205 NLDBIP_16205 Morganella morganii S4 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase
LHKJJB_15635 LHKJJB_15635 Morganella morganii S3 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase
HKOGLL_14755 HKOGLL_14755 Morganella morganii S5 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase
F4V73_RS07670 F4V73_RS07670 Morganella psychrotolerans mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase
PMI_RS04080 PMI_RS04080 Proteus mirabilis HI4320 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase

Distribution of group_1982 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1982 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1982

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1982.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mepS 7

Product

# Product Occurence
1 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0791 7 M Cell wall/membrane/envelope biogenesis (M) Cell wall-associated hydrolase, NlpC_P60 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K13694 7 murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00877 7 NlpC/P60 family

Annotations of the 34 SwissProt hits

Annotation Number of occurrences
Bifunctional muramidase/DL-endopeptidase CwlT 1
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS 1
Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase 2
Gamma-DL-glutamyl hydrolase 1
Murein DD-endopeptidase MepH 1
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 4
Peptidoglycan DL-endopeptidase CwlO 2
Peptidoglycan endopeptidase LytF 1
Peptidoglycan endopeptidase RipA 1
Peptidoglycan endopeptidase RipB 2
Peptidoglycan hydrolase Cwl0971 1
Probable endopeptidase Cgl2188 1
Probable endopeptidase HI_1314 1
Probable endopeptidase MT2245 1
Probable endopeptidase Mb2213c 1
Probable endopeptidase NlpC 1
Probable endopeptidase NlpC homolog 1
Probable endopeptidase Rv2190c 1
Probable endopeptidase YafL 1
Probable endopeptidase cgR_2070 1
Probable endopeptidase p60 6
Probable peptidoglycan endopeptidase LytE 1
Protein P54 1

Protein length

Min length 184
Max length 204
Mean length (sd) 186.9 (7.6)
Median length 184.0

Protein length distribution