Orthogroup:group_1974



Homologs in group_1974

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14815 FBDBKF_14815 Morganella morganii S1 lysP Amino acid permease
EHELCC_15620 EHELCC_15620 Morganella morganii S2 lysP Amino acid permease
NLDBIP_16150 NLDBIP_16150 Morganella morganii S4 lysP Amino acid permease
LHKJJB_15690 LHKJJB_15690 Morganella morganii S3 lysP Amino acid permease
HKOGLL_14810 HKOGLL_14810 Morganella morganii S5 lysP Amino acid permease
F4V73_RS07615 F4V73_RS07615 Morganella psychrotolerans - amino acid permease
PMI_RS04130 PMI_RS04130 Proteus mirabilis HI4320 - amino acid permease

Distribution of group_1974 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1974 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1974

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1974.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lysP 5
2 - 2

Product

# Product Occurence
1 Amino acid permease 5
2 amino acid permease 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0833 7 E Amino acid transport and metabolism (E) Amino acid permease

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11733 7 lysine-specific permease - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00324 7 Amino acid permease

Annotations of the 163 SwissProt hits

Annotation Number of occurrences
Amino acid transporter 1 1
Amino-acid permease 1 1
Amino-acid permease AapA 1
Amino-acid permease GAP1 1
Amino-acid permease GAP3 1
Amino-acid permease GAP5 1
Amino-acid permease GAP6 1
Amino-acid permease RocC 1
Amino-acid permease RocE 1
Amino-acid permease inda1 1
Arginine permease CAN1 2
Arginine/agmatine antiporter 6
Arginine/ornithine antiporter 1
Arginine/ornithine antiporter ArcD1 1
Aromatic amino acid permease FywP 1
Aromatic amino acid transport protein AroP 8
Aspartate-proton symporter 1
Basic amino-acid permease 1
Branched-chain amino acid permease BcaP 2
Cadaverine/lysine antiporter 3
Cationic amino acid transporter 1 2
Cationic amino acid transporter 2 7
Cationic amino acid transporter 2, vacuolar 1
Cationic amino acid transporter 3 2
Cationic amino acid transporter 3, mitochondrial 1
Cationic amino acid transporter 4 2
Cationic amino acid transporter 4, vacuolar 1
Cationic amino acid transporter 5 1
Cationic amino acid transporter 6, chloroplastic 1
Cationic amino acid transporter 7, chloroplastic 1
Cationic amino acid transporter 8, vacuolar 1
Cationic amino acid transporter 9, chloroplastic 1
Cystine/glutamate transporter 1
D-serine/D-alanine/glycine transporter 3
DL-alanine permease SerP2 1
Dicarboxylic amino acid permease 1
Gamma-aminobutyric acid permease 2
General amino acid permease AGP1 3
General amino acid permease AGP2 1
General amino acid permease AGP3 1
General amino-acid permease GAP1 1
General amino-acid permease GAP2 1
Glutamate/serine transporter AimA 1
High affinity cationic amino acid transporter 1 3
High-affinity glutamine permease 1
Histidine permease 1
Histidine permease HisP 1
L-asparagine permease 3
L-asparagine permease 1 3
L-asparagine permease 2 3
Large neutral amino acids transporter small subunit 2 5
Leu/Val/Ile amino-acid permease 1
Low-affinity putrescine importer PlaP 2
Lysine-specific permease 1
Lysine-specific permease LysP 2
Lysine/arginine permease 1
Lysine/arginine permease CAN1 1
Methylthioribose transporter 1
Phenylalanine-specific permease 1
Probable GABA permease 1
Probable S-methylmethionine permease 1
Probable amino-acid permease PB1C11.02 1
Probable amino-acid permease meu22 1
Probable cationic amino acid transporter 1
Probable fructoselysine/psicoselysine transporter FrlA 2
Probable lysine/arginine permease CAN2 1
Probable lysine/arginine permease CAN3 1
Probable proline-specific permease put4 1
Probable threonine/serine transporter YbxG 1
Probable transport protein YifK 3
Proline-specific permease 2
Proline-specific permease ProY 4
Putative histidine permease 1
Putrescine importer PuuP 1
S-adenosylmethionine permease GAP4 1
S-adenosylmethionine permease SAM3 1
S-methylmethionine permease 1 1
SPS-sensor component SSY1 1
Serine permease SerP1 1
Serine/threonine exchanger SteT 1
Sexual differentiation process putative amino-acid permease isp5 1
Solute carrier family 7 member 12 1
Solute carrier family 7 member 13 2
Solute carrier family 7 member 14 1
Thiamine transporter thi9 1
Tryptophan permease 1
Uncharacterized amino acid permease YbgF 1
Uncharacterized amino acid permease YecA 1
Uncharacterized amino acid permease YtnA 1
Uncharacterized amino acid permease YvbW 1
Uncharacterized amino-acid permease C359.01 1
Uncharacterized amino-acid permease C460.01c 1
Uncharacterized amino-acid permease C777.04 1
Uncharacterized amino-acid permease C965.11c 1
Uncharacterized amino-acid permease P7G5.06 1
Uncharacterized amino-acid permease PB2B2.01 1
Uncharacterized protein MG225 1
Uncharacterized protein MJ0609 1
Uncharacterized transporter MT2031 1
Uncharacterized transporter Mb2001c 1
Uncharacterized transporter Rv1979c 1
Uncharacterized transporter YcgH 1
Uncharacterized transporter YdgF 1
Uncharacterized transporter in pepV 3'region (Fragment) 1
Valine amino-acid permease 1
Valine/tyrosine/tryptophan amino-acid permease 1 1
Y+L amino acid transporter 1 1
Y+L amino acid transporter 2 4

Protein length

Min length 493
Max length 499
Mean length (sd) 494.1 (2.3)
Median length 493.0

Protein length distribution