Orthogroup:group_1969


Homologs in group_1969

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14765 FBDBKF_14765 Morganella morganii S1 tmaR PTS system regulator TmaR
EHELCC_15570 EHELCC_15570 Morganella morganii S2 tmaR PTS system regulator TmaR
NLDBIP_16100 NLDBIP_16100 Morganella morganii S4 tmaR PTS system regulator TmaR
LHKJJB_15740 LHKJJB_15740 Morganella morganii S3 tmaR PTS system regulator TmaR
HKOGLL_14860 HKOGLL_14860 Morganella morganii S5 tmaR PTS system regulator TmaR
F4V73_RS07560 F4V73_RS07560 Morganella psychrotolerans tmaR PTS system regulator TmaR
PMI_RS04175 PMI_RS04175 Proteus mirabilis HI4320 tmaR PTS system regulator TmaR

Distribution of group_1969 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1969 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1969

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1969.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tmaR 7

Product

# Product Occurence
1 PTS system regulator TmaR 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2926 7 S Function unknown (S) Uncharacterized conserved protein YeeX, DUF496 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09802 7 uncharacterized protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04363 7 Protein of unknown function (DUF496)

Annotations of the 85 SwissProt hits

Annotation Number of occurrences
UPF0265 protein APJL_0708 1
UPF0265 protein APL_0709 1
UPF0265 protein APP7_0751 1
UPF0265 protein ASA_0299 1
UPF0265 protein Asuc_0921 1
UPF0265 protein BPEN_475 1
UPF0265 protein BU556 1
UPF0265 protein BUAP5A_549 1
UPF0265 protein BUAPTUC7_550 1
UPF0265 protein BUsg_538 1
UPF0265 protein Bfl460 1
UPF0265 protein CGSHiEE_06200 1
UPF0265 protein CGSHiGG_09540 1
UPF0265 protein ECA2560 1
UPF0265 protein ESA_01212 1
UPF0265 protein ETA_13650 1
UPF0265 protein Ent638_2575 1
UPF0265 protein FN0411 1
UPF0265 protein HAPS_0398 1
UPF0265 protein HD_1377 1
UPF0265 protein HI_1168 1
UPF0265 protein KPK_1722 1
UPF0265 protein KPN78578_24220 1
UPF0265 protein MS1572 1
UPF0265 protein NT01EI_1321 1
UPF0265 protein NTHI1336 1
UPF0265 protein PBPRA1961 1
UPF0265 protein PC1_1767 1
UPF0265 protein PM0836 1
UPF0265 protein PMI0851 1
UPF0265 protein Ping_2721 1
UPF0265 protein SG1134 1
UPF0265 protein Spro_3208 1
UPF0265 protein VC0395_0679/VC395_A0572 1
UPF0265 protein VCM66_A0700 1
UPF0265 protein VC_A0741 1
UPF0265 protein VFMJ11_A0615 1
UPF0265 protein VF_A0606 1
UPF0265 protein VIBHAR_05346 1
UPF0265 protein VPA1226 1
UPF0265 protein VSAL_II0603 1
UPF0265 protein VS_II0351 1
UPF0265 protein VV2_0759 1
UPF0265 protein VVA1227 1
UPF0265 protein YE2755 1
UPF0265 protein YPA_0855 1
UPF0265 protein YPDSF_1416 1
UPF0265 protein YPK_2514 1
UPF0265 protein YPN_2420 1
UPF0265 protein YPO1560/y2607/YP_1448 1
UPF0265 protein YPTB1571 1
UPF0265 protein YPTS_1683 1
UPF0265 protein YeeX 31
UPF0265 protein YpsIP31758_2417 1
UPF0265 protein plu2843 1

Protein length

Min length 108
Max length 112
Mean length (sd) 108.6 (1.5)
Median length 108.0

Protein length distribution