Orthogroup:group_1964


Homologs in group_1964

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14735 FBDBKF_14735 Morganella morganii S1 rpmF 50S ribosomal protein L32
EHELCC_15540 EHELCC_15540 Morganella morganii S2 rpmF 50S ribosomal protein L32
NLDBIP_16070 NLDBIP_16070 Morganella morganii S4 rpmF 50S ribosomal protein L32
LHKJJB_15770 LHKJJB_15770 Morganella morganii S3 rpmF 50S ribosomal protein L32
HKOGLL_14890 HKOGLL_14890 Morganella morganii S5 rpmF 50S ribosomal protein L32
F4V73_RS07530 F4V73_RS07530 Morganella psychrotolerans rpmF 50S ribosomal protein L32
PMI_RS04205 PMI_RS04205 Proteus mirabilis HI4320 rpmF 50S ribosomal protein L32

Distribution of group_1964 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1964 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1964

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1964.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpmF 7

Product

# Product Occurence
1 50S ribosomal protein L32 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0333 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L32

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02911 7 large subunit ribosomal protein L32 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01783 7 Ribosomal L32p protein family

Annotations of the 459 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein bL32 453
Large ribosomal subunit protein bL32A 5
Large ribosomal subunit protein bL32B 1

Protein length

Unique protein length 56

Protein length distribution