COG0034


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0034, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Glutamine phosphoribosylpyrophosphate amidotransferase
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG0034 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1910 FBDBKF_14235 46462 47979 -1 purF amidophosphoribosyltransferase Morganella morganii S1
1 group_1910 EHELCC_08045 69006 70523 1 purF amidophosphoribosyltransferase Morganella morganii S2
2 group_1910 NLDBIP_08370 69006 70523 1 purF amidophosphoribosyltransferase Morganella morganii S4
3 group_1910 LHKJJB_05895 186636 188153 -1 purF amidophosphoribosyltransferase Morganella morganii S3
4 group_1910 HKOGLL_05020 53597 55114 1 purF amidophosphoribosyltransferase Morganella morganii S5
5 group_1910 F4V73_RS02675 562574 564091 1 purF amidophosphoribosyltransferase Morganella psychrotolerans
6 group_1910 PMI_RS08745 1912830 1914347 -1 purF amidophosphoribosyltransferase Proteus mirabilis HI4320