K01439


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01439, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01439
KO K01439
Description succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]

KO part of 4 pathways

Lysine biosynthesis
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of amino acids

KO part of 1 modules

M00016 Lysine metabolism Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine

Occurence in the database

K01439 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1826 PMI_RS07575 1654004 1655134 1 dapE succinyl-diaminopimelate desuccinylase Proteus mirabilis HI4320
1 group_1826 FBDBKF_13525 82501 83631 1 dapE succinyl-diaminopimelate desuccinylase Morganella morganii S1
2 group_1826 EHELCC_08570 191560 192690 -1 dapE succinyl-diaminopimelate desuccinylase Morganella morganii S2
3 group_1826 NLDBIP_08895 191560 192690 -1 dapE succinyl-diaminopimelate desuccinylase Morganella morganii S4
4 group_1826 LHKJJB_05370 64469 65599 1 dapE succinyl-diaminopimelate desuccinylase Morganella morganii S3
5 group_1826 HKOGLL_05545 176151 177281 -1 dapE succinyl-diaminopimelate desuccinylase Morganella morganii S5
6 group_1826 F4V73_RS03235 690219 691349 -1 dapE succinyl-diaminopimelate desuccinylase Morganella psychrotolerans