Orthogroup:group_1815


Homologs in group_1815

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13455 FBDBKF_13455 Morganella morganii S1 znuB ABC-type Mn2+/Zn2+ transport system, permease component
EHELCC_08640 EHELCC_08640 Morganella morganii S2 znuB ABC-type Mn2+/Zn2+ transport system, permease component
NLDBIP_08965 NLDBIP_08965 Morganella morganii S4 znuB ABC-type Mn2+/Zn2+ transport system, permease component
LHKJJB_05300 LHKJJB_05300 Morganella morganii S3 znuB ABC-type Mn2+/Zn2+ transport system, permease component
HKOGLL_05615 HKOGLL_05615 Morganella morganii S5 znuB ABC-type Mn2+/Zn2+ transport system, permease component
F4V73_RS03310 F4V73_RS03310 Morganella psychrotolerans - metal ABC transporter permease
PMI_RS04980 PMI_RS04980 Proteus mirabilis HI4320 - metal ABC transporter permease

Distribution of group_1815 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1815 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1815

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1815.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 znuB 5
2 - 2

Product

# Product Occurence
1 ABC-type Mn2+/Zn2+ transport system, permease component 5
2 metal ABC transporter permease 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1108 7 P Inorganic ion transport and metabolism (P) ABC-type Mn2+/Zn2+ transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11605 7 manganese/iron transport system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00950 7 ABC 3 transport family

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG012585 7 iron/manganese ABC transporter permease subunit SitC VF1116 Nutritional/Metabolic factor

Annotations of the 34 SwissProt hits

Annotation Number of occurrences
Chelated iron transport system membrane protein YfeC 1
Chelated iron transport system membrane protein YfeD 1
High-affinity zinc uptake system membrane protein ZnuB 6
Manganese import system permease protein ScaB 3
Manganese transport system membrane protein MntB 1
Manganese transport system membrane protein MntC 4
Manganese transport system membrane protein MntD 1
Probable iron transport system membrane protein HI_0359 1
Probable iron transport system membrane protein HI_0360 1
Probable metal transport system membrane protein CPn_0346/CP_0414/CPj0346/CpB0353 1
Probable metal transport system membrane protein CPn_0347/CP_0413/CPj0347/CpB0354 1
Probable metal transport system membrane protein CPn_0543/CP_0209/CPj0543/CpB0565 1
Probable metal transport system membrane protein CT_069 1
Probable metal transport system membrane protein CT_070 1
Probable metal transport system membrane protein CT_417 1
Probable metal transport system membrane protein TC_0341 1
Probable metal transport system membrane protein TC_0342 1
Probable metal transport system membrane protein TC_0698 1
Probable metal transport system membrane protein TM_0125 1
Probable metal transport system membrane protein TP_0036 1
Uncharacterized membrane protein in ycf23-apcF intergenic region 1
Uncharacterized membrane protein slr2045 1
Zinc transport system membrane protein TroC 1
Zinc transport system membrane protein TroD 1

Protein length

Min length 291
Max length 303
Mean length (sd) 292.7 (4.5)
Median length 291.0

Protein length distribution