Orthogroup:group_1784


Homologs in group_1784

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13010 FBDBKF_13010 Morganella morganii S1 cueR Cu(I)-responsive transcriptional regulator
EHELCC_06325 EHELCC_06325 Morganella morganii S2 cueR Cu(I)-responsive transcriptional regulator
NLDBIP_06645 NLDBIP_06645 Morganella morganii S4 cueR Cu(I)-responsive transcriptional regulator
LHKJJB_03525 LHKJJB_03525 Morganella morganii S3 cueR Cu(I)-responsive transcriptional regulator
HKOGLL_07000 HKOGLL_07000 Morganella morganii S5 cueR Cu(I)-responsive transcriptional regulator
F4V73_RS16195 F4V73_RS16195 Morganella psychrotolerans cueR Cu(I)-responsive transcriptional regulator
PMI_RS10705 PMI_RS10705 Proteus mirabilis HI4320 cueR Cu(I)-responsive transcriptional regulator

Distribution of group_1784 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1784 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1784

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1784.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cueR 7

Product

# Product Occurence
1 Cu(I)-responsive transcriptional regulator 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0789 7 K Transcription (K) DNA-binding transcriptional regulator, MerR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K19591 7 MerR family transcriptional regulator, copper efflux regulator - Multidrug resistance, efflux pump MexPQ-OpmE

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13411 7 MerR HTH family regulatory protein

Annotations of the 45 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional activator TipA 2
HTH-type transcriptional activator mta 1
HTH-type transcriptional regulator AdhR 1
HTH-type transcriptional regulator CueR 9
HTH-type transcriptional regulator HmrR 2
HTH-type transcriptional regulator TnrA 1
HTH-type transcriptional regulator YfmP 1
HTH-type transcriptional regulator ZntR 2
HTH-type transcriptional regulator ZntR homolog 1
Heavy metal-dependent transcription regulator 1 1
Heavy metal-dependent transcription regulator 2 1
Mercuric resistance operon regulatory protein 8
Mercuric resistance operon regulatory protein (Fragment) 1
Multidrug-efflux transporter 1 regulator 1
Multidrug-efflux transporter 2 regulator 1
Nodulation protein NolA 2
Nodulation protein NolA (Fragment) 1
Probable heavy metal-dependent transcriptional regulator HI_0293 1
Redox-sensitive transcriptional activator SoxR 4
Uncharacterized HTH-type transcriptional regulator HI_0186 1
Uncharacterized HTH-type transcriptional regulator PA4778 1
Uncharacterized HTH-type transcriptional regulator YyaN 1
Uncharacterized HTH-type transcriptional regulator slr0701 1

Protein length

Min length 133
Max length 139
Mean length (sd) 137.4 (2.0)
Median length 138.0

Protein length distribution