COG0137


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0137, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Argininosuccinate synthase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0137 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1744 FBDBKF_12160 88232 89455 -1 argG argininosuccinate synthase Morganella morganii S1
1 group_1744 EHELCC_14145 45250 46473 1 argG argininosuccinate synthase Morganella morganii S2
2 group_1744 NLDBIP_15240 49187 50410 1 argG argininosuccinate synthase Morganella morganii S4
3 group_1744 LHKJJB_15370 88232 89455 -1 argG argininosuccinate synthase Morganella morganii S3
4 group_1744 HKOGLL_14490 74895 76118 -1 argG argininosuccinate synthase Morganella morganii S5
5 group_1744 F4V73_RS16970 15927 17150 -1 argininosuccinate synthase Morganella psychrotolerans
6 group_1744 PMI_RS16015 3558811 3560022 1 argininosuccinate synthase Proteus mirabilis HI4320