K01940


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01940, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01940
KO K01940
Description argininosuccinate synthase [EC:6.3.4.5]

KO part of 6 pathways

Arginine biosynthesis
Alanine, aspartate and glutamate metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Fluid shear stress and atherosclerosis

KO part of 3 modules

M00029 Arginine and proline metabolism Urea cycle
M00844 Arginine and proline metabolism Arginine biosynthesis, ornithine => arginine
M00845 Arginine and proline metabolism Arginine biosynthesis, glutamate => acetylcitrulline => arginine

Occurence in the database

K01940 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1744 PMI_RS16015 3558811 3560022 1 argininosuccinate synthase Proteus mirabilis HI4320
1 group_1744 FBDBKF_12160 88232 89455 -1 argG argininosuccinate synthase Morganella morganii S1
2 group_1744 EHELCC_14145 45250 46473 1 argG argininosuccinate synthase Morganella morganii S2
3 group_1744 NLDBIP_15240 49187 50410 1 argG argininosuccinate synthase Morganella morganii S4
4 group_1744 LHKJJB_15370 88232 89455 -1 argG argininosuccinate synthase Morganella morganii S3
5 group_1744 HKOGLL_14490 74895 76118 -1 argG argininosuccinate synthase Morganella morganii S5
6 group_1744 F4V73_RS16970 15927 17150 -1 argininosuccinate synthase Morganella psychrotolerans