Orthogroup:group_1761


Homologs in group_1761

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12260 FBDBKF_12260 Morganella morganii S1 rraA ribonuclease E activity regulator RraA
EHELCC_14045 EHELCC_14045 Morganella morganii S2 rraA ribonuclease E activity regulator RraA
NLDBIP_15140 NLDBIP_15140 Morganella morganii S4 rraA ribonuclease E activity regulator RraA
LHKJJB_15470 LHKJJB_15470 Morganella morganii S3 rraA ribonuclease E activity regulator RraA
HKOGLL_14590 HKOGLL_14590 Morganella morganii S5 rraA ribonuclease E activity regulator RraA
F4V73_RS17090 F4V73_RS17090 Morganella psychrotolerans rraA ribonuclease E activity regulator RraA
PMI_RS15890 PMI_RS15890 Proteus mirabilis HI4320 rraA ribonuclease E activity regulator RraA

Distribution of group_1761 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1761 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1761

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1761.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rraA 7

Product

# Product Occurence
1 ribonuclease E activity regulator RraA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0684 7 J Translation, ribosomal structure and biogenesis (J) RNA degradosome component RraA (regulator of RNase E activity)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02553 7 regulator of ribonuclease activity A - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03737 7 Aldolase/RraA

Annotations of the 189 SwissProt hits

Annotation Number of occurrences
3-hexulose-6-phosphate synthase 1
4-hydroxy-4-methyl-2-oxoglutarate aldolase 1
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 90
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 1
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 1
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 1
Regulator of ribonuclease activity A 93
Uncharacterized protein MJ0644 1

Protein length

Min length 172
Max length 182
Mean length (sd) 177.0 (2.9)
Median length 177.0

Protein length distribution