Homologs in group_1722

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12025 FBDBKF_12025 76.8 Morganella morganii S1 yceK Uncharacterized conserved protein YceK
EHELCC_14280 EHELCC_14280 76.8 Morganella morganii S2 yceK Uncharacterized conserved protein YceK
NLDBIP_15375 NLDBIP_15375 76.8 Morganella morganii S4 yceK Uncharacterized conserved protein YceK
LHKJJB_15235 LHKJJB_15235 76.8 Morganella morganii S3 yceK Uncharacterized conserved protein YceK
HKOGLL_14355 HKOGLL_14355 76.8 Morganella morganii S5 yceK Uncharacterized conserved protein YceK
PMI_RS14085 PMI_RS14085 46.8 Proteus mirabilis HI4320 - YceK/YidQ family lipoprotein

Distribution of the homologs in the orthogroup group_1722

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1722

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADM5 1.25e-17 75 41 3 108 3 yidQ Uncharacterized protein YidQ Shigella flexneri
P0ADM4 1.25e-17 75 41 3 108 3 yidQ Uncharacterized protein YidQ Escherichia coli (strain K12)
P0AB31 1.28e-06 45 38 3 67 3 yceK Uncharacterized protein YceK Escherichia coli (strain K12)
P0AB32 1.28e-06 45 38 3 67 3 yceK Uncharacterized protein YceK Escherichia coli O157:H7
P44028 0.000214 40 40 4 70 4 HI_0650 Uncharacterized protein HI_0650 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14630
Feature type CDS
Gene -
Product YceK/YidQ family lipoprotein
Location 159514 - 159867 (strand: -1)
Length 354 (nucleotides) / 117 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1722
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07119 Protein of unknown function (DUF1375)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5645 Function unknown (S) S Uncharacterized conserved protein YceK

Protein Sequence

MTRTYIHNCIIVSGLLSLSTALSGCSSIMTRTGPTEGYYAGTKNSIAMLQDDETGWVMKPVIAIDLPLSAALDTLLAPVDYALEGKDNSLTSPAARVKQLEAEKTAQHQPDAQPVQD

Flanking regions ( +/- flanking 50bp)

GTCAACGACCAGGCATTCTGAAGTATGACGAGTATATACAGGGATATATAATGACACGTACCTATATACATAACTGCATAATAGTAAGCGGGTTACTGAGCTTAAGCACGGCACTCAGCGGCTGCTCAAGCATCATGACCCGGACCGGTCCTACTGAGGGCTACTATGCAGGAACAAAAAACAGTATTGCGATGTTGCAGGATGACGAAACCGGCTGGGTGATGAAACCCGTCATCGCCATCGATTTACCTCTTTCGGCTGCGCTGGATACACTTCTCGCCCCGGTCGATTATGCGCTGGAAGGTAAAGATAACAGCCTGACGTCCCCGGCTGCGCGGGTAAAACAACTTGAAGCCGAAAAAACAGCACAACATCAGCCCGACGCTCAGCCGGTGCAGGATTAAAACAGCCCGGGGTTGTCAGAGATAAATATAATATTCTGCCACCGGGCCCT